Gene BamMC406_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4179 
Symbol 
ID6180578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1226720 
End bp1227829 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content70% 
IMG OID641683948 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001810859 
Protein GI172063208 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.888395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCC TGTTCGAACC GTTCAAACTC AAGGATGTCA CGCTGCGCAA CCGCATCGCG 
GTGCCGCCGA TGTGCCAGTA CGTCGCCGAG GACGGCGTCG TCAACGACTG GCATCACGTG
CATCTGGCCA GCATCGCGCG CGGCGGCGCG GGCCTCGTGA TCGCCGAGGC GACGGCCGTG
TCGCCGGAAG GCCGCATCAC GCCGGGCTGC GCCGGGCTGT GGACCGACGC GCAGGCCGAG
GCGTTCGCGC CGTCGGTCGC GGCGATCAAG GCGGCCGGTG CGGTGCCGGG CATCCAGATC
GCGCATGCGG GCCGCAAGGC GAGCGCGAAC CGTCCGTGGG AAGGCGACGA CCATATCGCC
GAAGGCGATC CGCGCGGCTG GCAGACCATC GCACCGTCGG CCGTGCCGTT CGGCGCGCAC
CTGCCGAAGG TGCCGCGGGC GATGACGCAC GACGACATCG CCCGCGTGCA GGCCGACTTC
GTCGCGTCGG CGAAGCGCGC CCGCGACCTC GGCTTCGAAT GGCTCGAGCT GCACTTCGCG
CACGGCTATC TCGGCCAGAG CTTCTTCTCG GTGCACGCGA ACCAGCGCGA CGACGAGTAC
GGCGGTTCCG CCGAAAACCG CGGCCGCTTC ATCGTCGACA CGCTGAAAGC CGTCCGCCAG
GTCTGGCCGG AGCACCTGCC GCTGACCGCG CGTCTCGGCG TGATCGAGTA CGACGGCCGC
GACGAAGAGA CGCTCGCCGA ATCGATCGCG CTCACGCAGC GGATGAAGCA GGAAGGGCTC
GACATGCTGA GCGTGTCGGT CGGCTTCTCG ACGCCCGACG CGCAGATTCC GTGGGGCCCG
GCGTTCCTCG CACCGATCGC CGAACGCGTG CGCCGCGAAG CCGGCCTGCC GGTGTCGTCC
GCATGGGGGA TCGACACGCC GCAACTCGCC AATCGCGTCG TCGCCGAGCA GCAGCTCGAC
CTCGTGATGG TCGGCCGCGC GCATCTTGCC GATCCGCACT GGCCGTACTA CGCGGCCAAG
CAGCTCGGCG TCGAGCGTCC GTCGTGGACG CTGCCCGCGC CGTACGCGCA CTGGCTCGAA
CGCTACCGCG TCGCCGACAA GGTGGCCTGA
 
Protein sequence
MSALFEPFKL KDVTLRNRIA VPPMCQYVAE DGVVNDWHHV HLASIARGGA GLVIAEATAV 
SPEGRITPGC AGLWTDAQAE AFAPSVAAIK AAGAVPGIQI AHAGRKASAN RPWEGDDHIA
EGDPRGWQTI APSAVPFGAH LPKVPRAMTH DDIARVQADF VASAKRARDL GFEWLELHFA
HGYLGQSFFS VHANQRDDEY GGSAENRGRF IVDTLKAVRQ VWPEHLPLTA RLGVIEYDGR
DEETLAESIA LTQRMKQEGL DMLSVSVGFS TPDAQIPWGP AFLAPIAERV RREAGLPVSS
AWGIDTPQLA NRVVAEQQLD LVMVGRAHLA DPHWPYYAAK QLGVERPSWT LPAPYAHWLE
RYRVADKVA