| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4178 |
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| Symbol | |
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| ID | 6180577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1225899 |
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| End bp | 1226585 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683947 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001810858 |
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| Protein GI | 172063207 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC TGGTTGTCTT GACCTCGCAC GACACGCTCG GCGACACCGG CAAGAAAACG
GGCTTCTGGC TCGAGGAACT GGCCGCACCG TACTACGCGT TCAAGGATGC GGGCGTCGAG
CTGACGCTCG CGTCGCCGAA GGGCGGCCAG CCGCCGCTCG ACCCGAAGAG CAGCGATCCG
ACCGCGCAAA CCGACGCGAC GCGTCGCTTC GACACGGATC CGGCGGCCAA GGCCGAACTT
GCCGCAACCC GCAAGCTGGC CGACGTGTCG ATCGACGATT ACGACGCGGT GTTCTATCCG
GGCGGGCATG GTCCGCTATG GGATCTCGCG GAGGATCTGC ATTCGATCGG CCTGATCGAG
CGCGCGCTGG CGGCCGGCAA GCCGGTCGCG GCCGTGTGCC ATGCGCCGGG CGTGCTGCGC
CACGTGAAGG ATCCGAAAAC CGCCGAGTCG GTCGTGCGCG GCAAGCGCGT GACGGGCTTC
ACCAACAGCG AGGAAGCGGC CGTCGAGCTG ACGGAAGTGG TGCCGTTCCT CGTCGAGGAC
ATGCTGACGA CCAACGGCGC GCAGTTCGAA CGGAGCACCG ACTGGGCGCC GCATGTCGTC
ACCGACGGGC TGCTGATCAC CGGGCAGAAC CCCGCATCGT CGGAACCCGC TGCCGAGGCG
CTGCTCGCGA AGCTCGGCCG CCAGTAA
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| Protein sequence | MKILVVLTSH DTLGDTGKKT GFWLEELAAP YYAFKDAGVE LTLASPKGGQ PPLDPKSSDP
TAQTDATRRF DTDPAAKAEL AATRKLADVS IDDYDAVFYP GGHGPLWDLA EDLHSIGLIE
RALAAGKPVA AVCHAPGVLR HVKDPKTAES VVRGKRVTGF TNSEEAAVEL TEVVPFLVED
MLTTNGAQFE RSTDWAPHVV TDGLLITGQN PASSEPAAEA LLAKLGRQ
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