| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4175 |
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| Symbol | |
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| ID | 6179260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1221862 |
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| End bp | 1223868 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641683944 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001810855 |
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| Protein GI | 172063204 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACA GTTCACCTGC TTCGGATGCC TTCGTCGCAA CGACGCCCAT TGCGCTGAAT
CACACGAACA ACGGAACAGT CACGTTCCGC TGGTTCGTGC AAAAGACCGA ATACAACCCG
GCTGCCGCGA CCTTTCGTCC GCTTGTGAAC GGCGAGGAAG CATTTGGTCA CGTGTACGAG
CAGATTTCGA AGGCGCGGCA CTCCATCGAT ATCATCTGCT GGGGCTTTCA GCCCTCGATG
ATGTTCAAGC GTGACGGCCA AGGAGTCGGC ATTGGCGAAC TGCTGCGTCA GAAGGGGGAA
GCTGGCGTCA AGGTGCGGTT GTTGGTCTGG CGCGATCCGG CGTTCGTATC GGAACTCAGC
GAAAACAACA TGCCCGGCAA CGACATCGCG ACGGATGTCA AACAACGGTT GCCGGATTCC
GCCTATGAGA CGTTCTCGAT GATGTCGCGT GACTACCAGA CCGATCAGCA GCGCAAGATC
GATGAGGAAT GGTACCGGCG CGCGAACCTG CACAACGTTA CGCTCAGCTT ACCGGCAGGG
CCGCGCGATG TATATATTGC GGCCAAGGGC GCGTTGTACC AAAAGGAAGC ATTCAAAAAC
ATTGACTTTG CGACACGCGG TTTCAGTGCG GTCAATCGCG CCGAAATCGC GTGGCATACG
TTCTGGCATG GAAAGGACCG GGACCGCGAT GTTTTGACGC GCGCGCAGAA CAGTGCATCG
ATGGGATTGG CCGAACCGAC GCATCACCAG AAAATGGTAC TTGTCGATTA CGAAGACCCG
GAGAATGCGC GTGGCTTCGT CATGGGGCAC AACATGCTCG ACCAGTACTG GGACACGAAC
GATCACAGCT ACGTGCGCAA GACGCCGACG ACGGGCCGCA ACGGGCTTTC GCCATGGCAG
GATATCTCTG CGTGGGTGAC AGGACCGGTG CTACGCTACC TGAACGAAAA TTTCTGTCAG
GCGTGGGACG ATGCAACAGG ACAAGGCCTT GCCGAGAAAC GCAAGGGTCT GCACACGCGA
CTGAAGGTGC GAATCGATCC GGGTGGCGAC ACCCGTGTCA TGTCGCAGAT ACTGCGCACG
CAGTCGCAGA AGGGCAAGCG CGACATCGAG AAGCTGTATC TTCAGGCCGT CAATAACGCG
ACGCAGCATG TCTTTATCGA AAATCAGTAT TTCCGGTGGG TGCCGCTCGC AGAGAGGATC
AAGGCGGTCG CGGTGCAGCA ACAGAAGTGG GGGCGAGATT CCGGCAAGCA CGGTATGGTG
TATCTGTTCG TCATCACGAA CTCCACCGAC GCGGCGGTGG GTACGGGAAC GCTGACAACG
TATCGCATGC TTGATGCGTT GGGACAGGCG AAATCGATGC CGGGCGTGGG AGCGATCTTG
CAGGAGAGCG ACCGCCAATC CGACCTGAGA AAACAATTTG CCGACGTGGT AAGCAAACAG
CAGGACGCCG GGCAGGAATA TCTGGGCGCG CTTCAGATGC AAGGTATGGC GAACACGCCC
GCGACCACGC AGGCGGTTGG GCAGGCGAAG CAAAAGGTCG ATCAACTCAA GGCGCAGCGT
GCCGGGATCG AGTCGCAAAT GAAGGGGCCG GCGCATCCGG TGATGAACCG CGACTATCCG
GGGCTCAAGG TGCATGTCTG TACGCTGGTT GCGCCGGATT CGCCGCCCGG AAAATGGGAG
CCCGTTTACG TACATGCCAA GCTGATGACG ATTGACGACA CGTTCACAAC CATCGGTTCG
GCGAACATCA ATACGCGGAG CATGGAAGCG GACAGCGAAC TCAACATCTG CCATGAACAC
GGCGATGTGA CGAAGCGATT GCGGCAGCAA TTATGGAATT TGCACACGGG TGGGAGGGGA
GCGCAGGATG ATCCCCAAGC AGCGTTCAAG AATTGGGAGC TTCTCATCAA TAACAACGCC
GATTTTCAGA AGGCTGGCGA CCAGTCCCCC GCTGCATCTC TAGTCGGTTT TATGCGAACC
TCGAACAAAA TTACCCGTTC CGACTGA
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| Protein sequence | MANSSPASDA FVATTPIALN HTNNGTVTFR WFVQKTEYNP AAATFRPLVN GEEAFGHVYE
QISKARHSID IICWGFQPSM MFKRDGQGVG IGELLRQKGE AGVKVRLLVW RDPAFVSELS
ENNMPGNDIA TDVKQRLPDS AYETFSMMSR DYQTDQQRKI DEEWYRRANL HNVTLSLPAG
PRDVYIAAKG ALYQKEAFKN IDFATRGFSA VNRAEIAWHT FWHGKDRDRD VLTRAQNSAS
MGLAEPTHHQ KMVLVDYEDP ENARGFVMGH NMLDQYWDTN DHSYVRKTPT TGRNGLSPWQ
DISAWVTGPV LRYLNENFCQ AWDDATGQGL AEKRKGLHTR LKVRIDPGGD TRVMSQILRT
QSQKGKRDIE KLYLQAVNNA TQHVFIENQY FRWVPLAERI KAVAVQQQKW GRDSGKHGMV
YLFVITNSTD AAVGTGTLTT YRMLDALGQA KSMPGVGAIL QESDRQSDLR KQFADVVSKQ
QDAGQEYLGA LQMQGMANTP ATTQAVGQAK QKVDQLKAQR AGIESQMKGP AHPVMNRDYP
GLKVHVCTLV APDSPPGKWE PVYVHAKLMT IDDTFTTIGS ANINTRSMEA DSELNICHEH
GDVTKRLRQQ LWNLHTGGRG AQDDPQAAFK NWELLINNNA DFQKAGDQSP AASLVGFMRT
SNKITRSD
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