| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4170 |
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| Symbol | |
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| ID | 6181404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1213936 |
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| End bp | 1215636 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683939 |
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| Product | levanase |
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| Protein accession | YP_001810850 |
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| Protein GI | 172063199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00206489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCGC CGTACGCGGC ATGCGCCCTT CCTTCCCGCT TCGCGCAGCG GAGCACGGGC
CCCCGCATGA AATCGACGTT TTCCCGCTTT TCCTTCCGGT TCGCCTGCCT GCTCGCCTGT
GCGGGCAGCA TGCACGCAGC ACACGCGAGC TGCAGCGCGC CGCCCGCGAG CGCGACGCCC
CAATGGCGAC CCGCCATCCA TTACACGCCG CAACGCAACT GGATGAACGA TCCGAACGGC
CTCGTCTACG AGAACGGCCG CTATCACCTG TTCTACCAGT ACAACCCGCT CGGCCACGAC
TGGGGCAACA TGTCGTGGGG CCACGCGACC AGCACCGACC TCGTCCACTG GCGCGAGCAG
CCGGTCGCGA TGCGCGCAAA TGCCACGGAG GAAATCTTCT CAGGCTCGAT CGTCGCCGAC
ACGCACAATA CGTCCGGCCT CGGCGCACCG GGCGAGACAC CGCTCGTCGC GCTCTATACG
AGCGTCTACA AGGCCGGTTC CGGTCACGCG CCCGGCACGC AGGCGCAGTC GCTCGCATAC
AGCCTCGACC ACGGCGCGAC GTGGCAGCCC TATGCGCGCA ATCCGGTGCT CACGCTCGAT
CCGGAATCGA AGCAGTTTCG CGACCCGAAG GTGTCGTGGT ACGCGCCCGG GCGCTACTGG
CTGATGACGA CGGTCGTCGC CGACGCACAC GTCGTGAAGC TTTACCGTTC CGACGACCTG
ATCCACTGGT CGTTCCTGAG CGACTTCACG CTGCCGGACG TGCCGCATGC GGGCGCGCTG
TGGGAAATGC CGGACCTCGT GCCGCTGCCC GTCGACGACG ATCCGCGCCA CATCAAGTGG
GTCATGATCG TCAACGTCAA CCCGTGGTCG ATCGCCGGCG GCTCCGGTGC GATGTATTTC
GTCGGCAATT TCGACGGCCG CGCGTTCGTC CCCGACCGCG TCGCCCCGGC CGGTTCGGAC
CCGGCGCAAT TCCGCTGGGT CGATCATGGC GCCGATTTCT ATGCGGCGGG CACGTTCTCG
GGCGCGCCGG GCGCACGCCC CGCCGCGATT GCATGGATGA GCAACTGGGA CTATGCGGCG
AAAGCGCCGA CGGCACCTTG GCGCGGCGCG ATGACGTTGC CGCGCGAGTT CGCGCTGAAG
ACGATCGGCG GCGAACCCAC GCTCTTCGTG ACACCGGCCG CCGCGTTCGA TGCGTGGGCC
GACGCGCGGC CCGCCGTGCA TGAAGGCGAT CTGAGCGTCG AATCCGCCAC GCGCGCGTTG
TCGGCCACCA CGCGCGGCGT CGTTCAGCGC ATCACGGTGA CGATCGAGCC GCGGCGCGCG
GCCCGCGCCG GGTTGATCGT CCGCGGATCG GCGGACGGCG CGATCGGCAC CCGGATCGTG
TACGACACCG CGAAGCGCAC GCTCACGCTC GACCGCTCCC GCTCCGGCGC GACGGATTTC
GCCGGAAACT TCAGCCGGGA GCACATCGTC GATCTGCCGC TCGAGCACGG ACGATTGCAG
CTCGAAATCG TCGTCGATCG CGGTTCGGTC GAAGTGTTCG CGAACGGCGG CCGCGTGGCG
CTCACGGACC TGATCTTTCC GCCCCGCGAG GCGGACCGCG TCGCCGTGTT CGCCGAGCAT
GGCGGCGCGA CGTTCTCGGG GCTGACGGTG ACGCAGCTCG ATGCAGGTGA CGCACCCCGT
GACGACTGCG CATCGCGCTA G
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| Protein sequence | MSPPYAACAL PSRFAQRSTG PRMKSTFSRF SFRFACLLAC AGSMHAAHAS CSAPPASATP
QWRPAIHYTP QRNWMNDPNG LVYENGRYHL FYQYNPLGHD WGNMSWGHAT STDLVHWREQ
PVAMRANATE EIFSGSIVAD THNTSGLGAP GETPLVALYT SVYKAGSGHA PGTQAQSLAY
SLDHGATWQP YARNPVLTLD PESKQFRDPK VSWYAPGRYW LMTTVVADAH VVKLYRSDDL
IHWSFLSDFT LPDVPHAGAL WEMPDLVPLP VDDDPRHIKW VMIVNVNPWS IAGGSGAMYF
VGNFDGRAFV PDRVAPAGSD PAQFRWVDHG ADFYAAGTFS GAPGARPAAI AWMSNWDYAA
KAPTAPWRGA MTLPREFALK TIGGEPTLFV TPAAAFDAWA DARPAVHEGD LSVESATRAL
SATTRGVVQR ITVTIEPRRA ARAGLIVRGS ADGAIGTRIV YDTAKRTLTL DRSRSGATDF
AGNFSREHIV DLPLEHGRLQ LEIVVDRGSV EVFANGGRVA LTDLIFPPRE ADRVAVFAEH
GGATFSGLTV TQLDAGDAPR DDCASR
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