| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4169 |
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| Symbol | |
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| ID | 6181403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1213121 |
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| End bp | 1213870 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683938 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001810849 |
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| Protein GI | 172063198 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00125324 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCT TCGAAGGAAA GACGGTTCTG GTCACGGGCG GCAACAGCGG CATCGGCCTG
GCGGCCGCAC GGGCATTCGC GGCCGAAGGC GCGCGGGTCG TCATCACCGG CCGCGACGAG
CAGACGCTCG CCGCCGCCCG CGAGACGCTC GGCCGCGACG CGCTCGCGAT CCGCAACGAG
GCCGGCAGTG TCGCGTCGGC GCGGGCACTG GCGGACGCGC TCGCCGCGTC CGGCGTGCGG
CTCGACGCGG TGTTCATCAA TGCGGGCGTC GCGAAACTCG CGCCGTTCGC GGATAGCGAC
GAGGCGATGT GGGACCTCGT GTTCAACACC AACGTGAAGG GCGCGTATTT CCAGATCCAG
TCGCTCGTCC CGCTGCTGAA CCGTGGCGCG TCGATCGTGA TCAACGGGTC GATCAACGCG
CACATCGGGA TGCCGGGTTC GTCCGTGTAT GCGGCGAGCA AGGCCGCCGT CAATTCGTTC
GCGAAGACGC TGTCGACGGA ATTGCTGCCG CACGGCGTGC GGGTGAACGT GGTGAGCCCC
GGGCCGGTGC AGACGCCGCT GTACGGCAAG CTCGGCCTCG ATGCGGCGAC GCTCGACGAG
ACGGCCGACA AGATCAGGGG CCTCGTCCCG ATCGGCCGGT TCGGCACGCC GGACGAAATC
GCGTCGACGG TGCTGCACCT GAGTGCGCCC GAGTCCGCCT TCATCGTCGG CGCGGAAATC
ATCGCGTCGG GCGGGATGGG CTTGCTCTGA
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| Protein sequence | MQRFEGKTVL VTGGNSGIGL AAARAFAAEG ARVVITGRDE QTLAAARETL GRDALAIRNE
AGSVASARAL ADALAASGVR LDAVFINAGV AKLAPFADSD EAMWDLVFNT NVKGAYFQIQ
SLVPLLNRGA SIVINGSINA HIGMPGSSVY AASKAAVNSF AKTLSTELLP HGVRVNVVSP
GPVQTPLYGK LGLDAATLDE TADKIRGLVP IGRFGTPDEI ASTVLHLSAP ESAFIVGAEI
IASGGMGLL
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