Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4162 |
Symbol | |
ID | 6180250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1205695 |
End bp | 1206849 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683931 |
Product | ABC-2 type transporter |
Protein accession | YP_001810842 |
Protein GI | 172063191 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.80712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.28462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGT GGGCGGGCCT GCGCGAATCG TTCTCGATCG CGCGCTGGTG GAGCATCGTG CTGAAGGAAT TCCTGCAGCT GCGCCGCGAT CGCGTCACGT TCGCGATGAT CGTCGGTGTG CCGATCATCC AGCTCGCGCT GTTCGGCTTC GCGATCAACA CCGATCCGAA GCACCTGCCG ACCGCGGTGA TCGTCGCCGA TTCGAGCCCC TTCGCACGCA GCTTCATCGC CGCGATGCGC AACTCCGCGT ACTTCGACAT CGTCGCGACC CTGCCCGACG AAGCGGCCGG CCGGCAGGCG CTCGCGCGCG GCGACGTGCA GTTCGTGCTG AGCGTGCCGG CCGATTTCTC GAAGCGGCTG CTGCGCGGCG AGCATCCGTC GCTGCTCGTC GAGGCGGACG CGACCGATCC CGTCGCGACC GCATCCGCGA TCGGCGCGCT GACGGGTCTC GTGCAGCCCG TCGCGGACAA GGACCTGACG GGCCCGCTCG CGCGCCTGAA CGGCCGCCCG GCCGCGTTCG ACGTCGTGCT GCACCGTCTG TACAACCCCG AGGGCATCAC GCAGTACAAC GTCGTGCCGG GCCTGATGGG CGTGATCCTG ACGATGACGA TGGTGATGAT GACCGGCCTC GCGATCACCC GCGAACGCGA GCGCGGCACG ATGGAAAACC TGCTCGCGAC ACCCGTGCGG CCGCTCGAGG TGATGACGGG CAAGATCGTC CCGTACGTGT TCATCGGGCT GATCCAGGTG TCGATCATTC TCGCGGCCGC GCGGTACGTG TTCGAGGTGC CGTTCGTCGG CGGCGTGTTC GCGATCTACC TCGCCGCGCT GCTCTTCATC GCCGCGAACC TGACGGTCGG CATCACGCTG TCGTCGCTCG CGCAGAACCA GTTGCAGGCG ATGCAGCTCG CGGTGTTCTA CTTCCTGCCG AACATCCTGC TGTCGGGCTT CATGTTCCCG TTCGCCGGGA TGCCGAAGTG GGCGCAGTTC ATCGGCAACC TGCTGCCGCT CACCTACTTC AACCGCCTCG TGCGCGGCAT CCTGCTGAAA GGCAACGCCT GGGCCGACCT GTGGCCGTCC GTGTGGCCCG TCGCGCTGTT CACCCTCGTC GTGATGAGCG TCGCGCTGCG CTTCTACCGG CGCACGCTCG ATTAG
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Protein sequence | MNAWAGLRES FSIARWWSIV LKEFLQLRRD RVTFAMIVGV PIIQLALFGF AINTDPKHLP TAVIVADSSP FARSFIAAMR NSAYFDIVAT LPDEAAGRQA LARGDVQFVL SVPADFSKRL LRGEHPSLLV EADATDPVAT ASAIGALTGL VQPVADKDLT GPLARLNGRP AAFDVVLHRL YNPEGITQYN VVPGLMGVIL TMTMVMMTGL AITRERERGT MENLLATPVR PLEVMTGKIV PYVFIGLIQV SIILAAARYV FEVPFVGGVF AIYLAALLFI AANLTVGITL SSLAQNQLQA MQLAVFYFLP NILLSGFMFP FAGMPKWAQF IGNLLPLTYF NRLVRGILLK GNAWADLWPS VWPVALFTLV VMSVALRFYR RTLD
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