Gene BamMC406_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4157 
Symbol 
ID6181467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1197991 
End bp1199616 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content72% 
IMG OID641683926 
Productrhodanese domain-containing protein 
Protein accessionYP_001810837 
Protein GI172063186 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.759508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAAA CCGCTGATTC CACTTCCCGT TTCCCCGTCG CGTCGTACCA GGACGTACGC 
GCGCGCCTGC TGGCCCGCGA CGAGCTCGCG CTGATCGACG TGCGCGAGGA GGATCCCTAC
GCGCAGGGCC ATCCGCTGTG GGCCGCCAAC TTTCCGCTGT CCAAACTCGA ACTCGACGCG
TGGACGCGCA TTCCGCGCCG CGACACGCCG ATCGTCGTGT TCGGCGAAGC CGGCGGCGAG
GATCTCGCGC CGCGTGCGGC CGCGACGCTC GCGCAGCTCG GCTATACCGA CGTGCGGCTG
CTCGACGGCG GCCTCGCGGG CTGGCTCGCC GCGGGCGGCG AGTTGTTCAT CGACGTGAAC
GTGCCGAGCA AGTCGTTCGG CGAATGGGTC GAGGCCGAGC GGCATACGCC GTCGCTGTCC
GCGCAGGAGG TGCAGGCGCT GATCGACGCG AAGGCCGACG TCGTGATCGT CGACGCGCGC
CGCTTCGACG AATACCAGAC GATGAACATC CCGACATCGA CGAGCGTGCC GGGTGCGGAA
CTCGTGCTGC GCGTGCGCGC GCTCGCGCCG AACCCGCAGA CTCGGGTCGT GGTGAACTGC
GCGGGCCGCA CGCGCAGCAT CATCGGCACG CAGTCGCTGA TCAACGCCGG GCTGCCGAAC
CCGGTCGCCG CGCTGCGCAA CGGCACGATC GGCTGGACGC TCGCCGGCCA GACGCTCGAG
CGCGGCGCGT CGCGACGCTT TCCTGACGAC GTCGATCCCG CGCAGCGCGA CGAAGCCCGC
CGCGCCGCAC GCGCGGTGGC CGAGCGCGCG GGCGTGCCGC GCATCGCGCT CGCGGACGTC
GCCGCGCTCG ACGAACCGGG CCGCACGCTG TACCGCTTCG ACGTGCGCAC GCCGGAGGAA
TACGAGGCCG GCCATCTGCC GGGGTTCCTG AGCACGCCGG GCGGCCAGCT CGTGCAGGAG
ACAGACCATC ACGCGCCGGT GCGCGGCGCA CGGATCGTGC TGGCCGACGA CGACGGCGTG
CGCGCGGACA TGACCGCGTC GTGGCTCGCG CAGATGGGCT GGGACGTGCG CGTGGTCGAG
CCGGCCGGCA CGGCGGCGTT CGTGGAGCGC GGCCAGCCGC CGCGCGACGT GCCGGCGACG
CCGCAGGTCA GCGAAGTATC ACCCGCGACG CTCGCGGGCT GGCTGAAAGA GGCGGCTGCG
GGCGAGATCG CGATCGTCGA CGTGACGACC AGCGCGAACT ACGCGAAGCG CCATATTCCC
GGCGCGTGGT TCGTCGTGCG CGCGCAGTTG CGCGACGCGC TCGCCGCGAT CCCGCCGGCG
AAGCGCTACG TATTCACGTG CGGATCGAGC CTGCTCGCGC GGTTCGCCGC GCACGACGCG
CGTGCGTTGC TGCCGGCGTC CGCGGCAATC TCGGTGCTGA CGGGCGGCAC GGCAGCGTGG
ATCGACGCGG GGCTGCCGCT CGAGCACGGC GACACGCATC TCGCGTCGCC GCGTGTCGAC
CGTTACCGGC GCCCGTACGA AGGTACCGAC AACGCGGCCG CCGCGATGCA GGCGTATCTC
GACTGGGAAT ACGGGCTGGT CGATCAGTTG AAGCGGGACG GTACGCACCA CTTCCGCGTG
ATCTGA
 
Protein sequence
MTQTADSTSR FPVASYQDVR ARLLARDELA LIDVREEDPY AQGHPLWAAN FPLSKLELDA 
WTRIPRRDTP IVVFGEAGGE DLAPRAAATL AQLGYTDVRL LDGGLAGWLA AGGELFIDVN
VPSKSFGEWV EAERHTPSLS AQEVQALIDA KADVVIVDAR RFDEYQTMNI PTSTSVPGAE
LVLRVRALAP NPQTRVVVNC AGRTRSIIGT QSLINAGLPN PVAALRNGTI GWTLAGQTLE
RGASRRFPDD VDPAQRDEAR RAARAVAERA GVPRIALADV AALDEPGRTL YRFDVRTPEE
YEAGHLPGFL STPGGQLVQE TDHHAPVRGA RIVLADDDGV RADMTASWLA QMGWDVRVVE
PAGTAAFVER GQPPRDVPAT PQVSEVSPAT LAGWLKEAAA GEIAIVDVTT SANYAKRHIP
GAWFVVRAQL RDALAAIPPA KRYVFTCGSS LLARFAAHDA RALLPASAAI SVLTGGTAAW
IDAGLPLEHG DTHLASPRVD RYRRPYEGTD NAAAAMQAYL DWEYGLVDQL KRDGTHHFRV
I