Gene BamMC406_4156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4156 
Symbol 
ID6180202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand+ 
Start bp1197323 
End bp1197889 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID641683925 
Productcysteine dioxygenase type I 
Protein accessionYP_001810836 
Protein GI172063185 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.793001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.481367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC TTTCGTTGCG GCAGACGCCG CTGCAACCCT TCGTCGACGG GCTGGGCGCG 
CTGCTCGCGT CCGGCGCGAA CGAGGCGCGC ATTCTCGACG AGGGCGGCGC GTTGCTCGCC 
GCCCTCGTCG CGCACGACGA CTGGCTGCCC GATGCGTTCG CGCAGCCCGA TCCCGAGCGC 
TATCGCCAGT ACCTGCTGCA TCTCGATCCC GACGAGCGGT TTTCCGTCGT CAGCTTCGTA 
TGGGGCCCCG GCCAGACGAC GCCGATCCAC AACCACACGG TCTGGGGGCT GATCGGGATG 
CTGCGCGGCG GCGAGTTTTC GCAGCCGTAC CGGTTCGACG CAACCGGCAA GCCGGTGCCG 
GCGGGCGAGG CGGTGCGGCT GCAGCCGGGC GAGATCGAGG CCGTGTCACC GCGCATCGGC 
GACGTCCATC GCGTGACCAA CGCGTTCGCG GATCAGGTAT CGATCAGCAT CCACGTGTAC 
GGCGCGAACA TCGGCAAGGT CGAACGCGCG GTGTTCCTCG ACGACGGCAC CGTGAAGCCA 
TTCGTGTCCG GCTATTCGAA CGCGTGA
 
Protein sequence
MSTLSLRQTP LQPFVDGLGA LLASGANEAR ILDEGGALLA ALVAHDDWLP DAFAQPDPER 
YRQYLLHLDP DERFSVVSFV WGPGQTTPIH NHTVWGLIGM LRGGEFSQPY RFDATGKPVP 
AGEAVRLQPG EIEAVSPRIG DVHRVTNAFA DQVSISIHVY GANIGKVERA VFLDDGTVKP 
FVSGYSNA