| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4155 |
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| Symbol | |
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| ID | 6180201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1196325 |
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| End bp | 1197248 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641683924 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810835 |
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| Protein GI | 172063184 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.532001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.288769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA GCGATATCGA CGCTTTTGCA GCGGTCATCC GCTGCCAGAC GCTCAGCCAG
GCCGCGACCG AGCTCGGGAT GACGCAGCCC GCGGTCACGC GGCGCATCCA GAACCTCGAG
GAAGCGCTCG GCGTGACGCT GCTCGATCGC AACACGAAGC CGCCGCGCCC GACCGACATC
GGCCGGCAGG TGTTCGAGCA GTGTCGCGCG ATCCTGCGCG AAGTCGATGC GCTGCGCGAA
CTGACGGCCG GCAAGCGGCC GCCCGCCGGC GAATTCCGCG TGGGCCTCAC GCAGGGGCTC
GGCGAGCTGA TGCTGCCCGG CCTGATCGCG CGGCTGGCCG CGCAATGGCC GGCGCTCACC
ACGCAGGTCA CGACCGCCTG GGGCGGCACG CTCGTCGAAC GCGTCGCGCG CCGCGAGCTC
GATGCGGCGC TGGTGTTTCT GGCCCGCGAG ATGGTGCTGC CGCCGCAGGT CGCGGGCGAA
CGGCTGCTGG CCACGCGGCT CGTCGCGGTC GGCCGCAAGG GCGACTGGCC GCGCCGCGGC
TACCGGCTTG CCGACTGCCA GGCGCGCGGC TGGGTGCTCA ATCCCGACGG CTGCGGGTTT
CGCGCGGGCC TGCGCCGGGC GCTCGACGCG CAGGGGCTGC CGATGCCGGT CACGCTCGAC
ACTTACGGCC GCGACCTGCA GTTGCAGAGC GTCGCGAACG GCTTCGGCAT CGGGTTGATG
CCGCTGCCGC TGCTCGACGG CAGCCCGCTG CGCGACGCGC TCGACATCGT GCCGCTCGCC
GATTTCAAGC CGCAGATCGA TATGTGGCTG CTGCACCGGC AGGACGCCGC GCGCTTCGCG
GCGCCGCTCG CGGCCCTGGC CGCGCACGCA CGCACGGCGT TCGCGCTGCC CGCGGATGCC
GCCGCGCAGG ACGAGGCCGC TTGA
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| Protein sequence | MKISDIDAFA AVIRCQTLSQ AATELGMTQP AVTRRIQNLE EALGVTLLDR NTKPPRPTDI
GRQVFEQCRA ILREVDALRE LTAGKRPPAG EFRVGLTQGL GELMLPGLIA RLAAQWPALT
TQVTTAWGGT LVERVARREL DAALVFLARE MVLPPQVAGE RLLATRLVAV GRKGDWPRRG
YRLADCQARG WVLNPDGCGF RAGLRRALDA QGLPMPVTLD TYGRDLQLQS VANGFGIGLM
PLPLLDGSPL RDALDIVPLA DFKPQIDMWL LHRQDAARFA APLAALAAHA RTAFALPADA
AAQDEAA
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