| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4146 |
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| Symbol | |
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| ID | 6180609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1186265 |
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| End bp | 1187221 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683915 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001810826 |
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| Protein GI | 172063175 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.287587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0410042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA CCCGACGTCA CTTTCTCGCG CAAGCAAGCG CTCTCGCCAC CACCTTCACC
GTCGCGCCGG CCGCGCTCCA TGCGCAATCG GGCGCGCGGC CGCTGCTGCG GGCCGGCGAT
CAGAAAGGCG GGCTGCGCGC GCTGCTCGAA GCGGCCGGCG AACTGAACGG CCTCGCGTAC
GACATCGCGT GGACCGAATT CCCGGCCGCC GCACCGCTGG CCGAAGCGCT AAACGCGGGA
GCCGTCGACT GCGGGCCGAT CGGCGACGCG CCGGTGATCT TCGCGCTTGC GTCGGGCGCC
CGCATCAAGG TGATCGCCGC GAACCGCTCC GACCCGTACG GCACCGCGGT GCTCGTGCGG
CCCGACGCCA CGCTGAAAGC CGCCGCCGAC CTGAAAGGCA AGCGCATCGG CACCACGCGC
GGCTCGATCG GCCATTTCGT CACGCTGAAG GCGCTCGACG CGGCCGGCTT GCCGCCGGAC
GCCGTATCGT TCCGCTTCCT GCCGCCCGCC GACACGATGC TTGCACTCGC AACCGGATCG
ATCGATGCGT GGGCGACCTG GGAACCCTAT ACGGCGCTCG CCGAAACGAG CGGCCGCGCG
CGCGTGCTCG TCGACGGCCG GGGCCTGTGG TCGGGCCTCA GCTACGTCGC CGCGACCGAG
GCTGCGATCG CGTCGAAGCG CGACGTGCTG CGCGACTTCC TGCAACGTGT CGTGCGCGCG
CAGATCTGGT CGTACCGGCA CGTCGACGCG TATTCCGCGG CGCTCGCGCG CATCATCGGC
ATCCCGCCGG CGGCCGCGAA GCTGCAGTTC GAGCGCCGCA ACACGCACTG GCAGCCGATC
GACGCGACGG TGATCGCCGC CCAGCAGCGC ACGGCCGACT TCTACCTGAA GGCCGGGCTG
CTGCGCCAGC CGCTCGACGT GCGCACGACC TTCGACCTCG GCTTTGCGCT CGCGTAA
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| Protein sequence | MNPTRRHFLA QASALATTFT VAPAALHAQS GARPLLRAGD QKGGLRALLE AAGELNGLAY
DIAWTEFPAA APLAEALNAG AVDCGPIGDA PVIFALASGA RIKVIAANRS DPYGTAVLVR
PDATLKAAAD LKGKRIGTTR GSIGHFVTLK ALDAAGLPPD AVSFRFLPPA DTMLALATGS
IDAWATWEPY TALAETSGRA RVLVDGRGLW SGLSYVAATE AAIASKRDVL RDFLQRVVRA
QIWSYRHVDA YSAALARIIG IPPAAAKLQF ERRNTHWQPI DATVIAAQQR TADFYLKAGL
LRQPLDVRTT FDLGFALA
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