Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4140 |
Symbol | |
ID | 6181528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1180262 |
End bp | 1181362 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641683910 |
Product | extracellular solute-binding protein |
Protein accession | YP_001810821 |
Protein GI | 172063170 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0884015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.2219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTTG CACCGAAACA GCTCGCCGCC GCGCTGGCGA TCGTCCTGGG CACCGCCGCC GGCGCTGCCG TCGCGCAGGT TCCGGCCGGA TATCCGGGTA ACTACCAGGG TGTCGTCGAC GCCGCGAAGA AGGAAGGAAA ACTGATCGTC TACTCGACGA CCGACACGGG CCTCGTGCGC CCGCTGATCA AGGACTTCGA AAGCCTGTAC GGGGTGAAGG TCGAGTACAA CGACATGAAC AGCACCGAGC TGTACAACCG CTACATCAGC GAGAACGCGG CCAGCAGCAC CAGCGCCGAC GTGCTGTGGA GCTCCGCGAT GGACCTGCAG GTCAAGCTCG TCAACGACGG CCTGATGGCG TCGTACGATT CGCCTGAAAG CCCGAACGTG CCGCAATGGG CGCAATACCA GAAGCAGGCG TACGGCACGA CCTTCGAGCC GCTCGCGATC GTCTACAACA AGCGCCTGAT CCCCGAGAAC GAGGTGCCGA AGACGCGCGC CGACCTGATC AAGCTGCTCA CCACGCAAGC CGACAAGTTC AAGGGCAAGG TCACGACCTA CGACATCGAG AAGTCGGGAG TCGGCTTCAA CTACCTGACG CAGGACGCGC ACGTGAACGA GAAGGTCACG TGGGAACTCG TGAAGGCGAT CGGCGCGACC GGCCCGAAAC TGCAGTCGAG CACCGGCGCG ATGATGGAGC GGATTTCGTC GGGCGAGAAC CTGATCGGCT ACAACATCAT CGGCTCGTAT GCGTACTCGA AGGCGAAGAA GGACAAGTCG ATCGGCTACG TGTTTCCGAA GGACTACACA CAGGTCGTGA GCCGCCTCGC CACGATCTCG AAGAAGGCGA AGAATCCGAA CGCCGCGAAG CTGTGGGTCG ACTACCTGCT GTCCAAGCGC GGCCAGACGG TGATCGCGAA CCAGGTGGAC CTGTACGCGA TCCGCACCGA CGTGAGCGGC GAAACGTCGG CCGCGAGCCT CACGAAGGAA CTCGGCGATT CGCTGAAGCC GATCCCGATC GGCACGGGTC TGCTCGTCTA CCTCGACCAG TCGAAGCGGC TCGCGTTCCT GAAGCAATGG CAGCAGGCGA TCAAGCGCTG A
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Protein sequence | MPFAPKQLAA ALAIVLGTAA GAAVAQVPAG YPGNYQGVVD AAKKEGKLIV YSTTDTGLVR PLIKDFESLY GVKVEYNDMN STELYNRYIS ENAASSTSAD VLWSSAMDLQ VKLVNDGLMA SYDSPESPNV PQWAQYQKQA YGTTFEPLAI VYNKRLIPEN EVPKTRADLI KLLTTQADKF KGKVTTYDIE KSGVGFNYLT QDAHVNEKVT WELVKAIGAT GPKLQSSTGA MMERISSGEN LIGYNIIGSY AYSKAKKDKS IGYVFPKDYT QVVSRLATIS KKAKNPNAAK LWVDYLLSKR GQTVIANQVD LYAIRTDVSG ETSAASLTKE LGDSLKPIPI GTGLLVYLDQ SKRLAFLKQW QQAIKR
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