| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4137 |
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| Symbol | |
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| ID | 6179721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1176056 |
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| End bp | 1177147 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683907 |
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| Product | porin |
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| Protein accession | YP_001810818 |
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| Protein GI | 172063167 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0387994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.314302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAC GCGCAGAACG TTCGATTCGC ACTGCTATCG TTACCGGCTC GGCTGCCGTC
GCCGGCCTCG CGGCAGGCGC CGCGCACGCG CAGTCGTCGG TCACGATGTA CGGGATCATG
GATGCCGGCA TCGAATACGC GAACCATGCG GCACCGGACG GCGGCAATTC GTTCAAGCTG
AAATCCGGCA ACAAGAACAC GTCGCGCTGG GGCTTGCGCG GCATCGAGGA TCTCGGCGGC
GGGCTGAAGG CCGTGTTCCG CCTCGAAAGC GGAATCGATC TCGCGAACGG CGCGTCCGAC
GACGGCCCCG ACTCGATCTT CGCGCGCCGC GCGACGGTCG GCCTGAAAGG CAAGTGGGGC
GAAGTCTCGC TCGGCCGCAA CTTCACCGTC ACCTACGACT ACATGCTGCC GTTCGACCCG
ATGGGCTACG CGCAGAACTA CTCGTGGGCG ACGTCGTCGA TGGCGACCGG CGGCCGCAAG
GACGGCCTGT TCACGCGTTC GTCGAACGCC GTGCGCTACG ACGGCGAATT CGGCGGCTTC
AAGTTCGGCG CGCTGTACGG CTTCGGCAAC GTGCCGGGCA GCGTGAAGAC CAGCTCGAAG
TACGACTTCG CGCTCGGCTA CGAGGCCGGC CCGTTCGCGG CGGTGGTCAC GTTCGACCGG
CAGAACGGCG CGGCCGACAG CGTCACGCCG GCCGATACCG TCAACTATAT CCAGGGCATC
CACGCGGGCC TGAGCTACGA CTTCGGCGAC CTGAAGACGA TGGCCGGCTA CCGCAACTAT
CGGCGTACGT ATCACACGAG CGCCGCGAAC CAGCTGAGCG ACATGTATTG GGTCGGCGGG
TCGTACCAGT TCACGCCGAC GTTCTCGCTG ATCGCGGCCG TCTATCACCA GAACATCAAG
GGCGGCACGG ATGCGGATCC GACGCTGGTG TCGGTGCGGG CGAACTATGC ACTGTCGAAG
CGCACGGTGC TGTATGCGGC CGGCGCGTTC GCGATCGCGC AGCATGGGCA GAAGGTCGGC
GTGTCGCGCG ATTTCGCCGG GTATGGCACC ACGCAAGTTG GCGTGACGGC GGGCATTCAG
CAGCGGTTCT GA
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| Protein sequence | MKSRAERSIR TAIVTGSAAV AGLAAGAAHA QSSVTMYGIM DAGIEYANHA APDGGNSFKL
KSGNKNTSRW GLRGIEDLGG GLKAVFRLES GIDLANGASD DGPDSIFARR ATVGLKGKWG
EVSLGRNFTV TYDYMLPFDP MGYAQNYSWA TSSMATGGRK DGLFTRSSNA VRYDGEFGGF
KFGALYGFGN VPGSVKTSSK YDFALGYEAG PFAAVVTFDR QNGAADSVTP ADTVNYIQGI
HAGLSYDFGD LKTMAGYRNY RRTYHTSAAN QLSDMYWVGG SYQFTPTFSL IAAVYHQNIK
GGTDADPTLV SVRANYALSK RTVLYAAGAF AIAQHGQKVG VSRDFAGYGT TQVGVTAGIQ
QRF
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