| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4136 |
|---|
| Symbol | |
|---|
| ID | 6179720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1175029 |
|---|
| End bp | 1175994 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641683906 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001810817 |
|---|
| Protein GI | 172063166 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.137043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.414924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG CAGTCGTGAA GAGCGCGGGC GAAAGCCCCC TCTATATGGA ATACGAAGCG
CCGCACGCGA GGCCGGGCCA CCGTCTGGTC GACATGACGG CGTCCGCGTT GAGCAGGCTC
GCGCAGGGGC GCGCGTCGGG CACGCATTAT TCGTCGGGAA GCGGCTATCC GTTCGTCGTC
GGCGTCGACG GCGTGGGCCG GCTCGACGAC GGCCAGCGCG TCTATATTTT CGGCGCCCCC
GCGCCGTTCG GCACGATGGC CGAGCGCACG ATCGTGCCCG ACGCCCAGTG CGTACCGCTG
CCGGACGGGC TCGACGACAT CACGGCCGCG GCGATCGCGA TTCCCGGGAT GTCGTCGTGG
GCGGCGCTGA TCGAACGCGC GCGCTTCGCG GCGGGCGAGA CGGTGCTCGT CAACGGTGCG
ACGGGAACGT CGGGCCGGCT CGCGGTGCGC ATCGCCAGGC ATCTCGGCGC CGCGAAAGTG
ATTGCGACGG GCCGCAACGC GGTTGCGCTG GAGGCATTGG TGAGTGCCGG CGCGGACGCC
GTCGTGTCGC TGCAGCAGGA CGGTGCGGAT CTGGCGCGTG CGCTTGAACC GCATTTCCGC
GCCGGAGTGG ACGTCGTGCT CGACTATCTG TGGGGCGCCA GTGCGCACGC GTTGCTGATC
ACGGCGGCGC GGTCGGCGCC CGATGGCCGG CGGTTGCGCT TCGTGCAGAT CGGCTCGATC
GGCGGTGCGG AAGTGCTGTT GCCGGGGGCC GTGCTGCGGG CGACGGCGAT CGAACTGATG
GGCAGCGGCC TCGGCAGCGT GTCGCCGGCG GGGTTGCTGG CCGCCGTGCG CGGCGTGTTC
GCCGCGGCCG GGCCGGCACG GTTGACGATC GACACCCGTA CGGTGCCGCT GTCGGCGGTC
GGCGAACACT GGAGCGATAC GAACAGTCTC GTGCGCCCGG TGTTCACGAT GCGCGACGGT
GCGTGA
|
|---|
| Protein sequence | MKAAVVKSAG ESPLYMEYEA PHARPGHRLV DMTASALSRL AQGRASGTHY SSGSGYPFVV
GVDGVGRLDD GQRVYIFGAP APFGTMAERT IVPDAQCVPL PDGLDDITAA AIAIPGMSSW
AALIERARFA AGETVLVNGA TGTSGRLAVR IARHLGAAKV IATGRNAVAL EALVSAGADA
VVSLQQDGAD LARALEPHFR AGVDVVLDYL WGASAHALLI TAARSAPDGR RLRFVQIGSI
GGAEVLLPGA VLRATAIELM GSGLGSVSPA GLLAAVRGVF AAAGPARLTI DTRTVPLSAV
GEHWSDTNSL VRPVFTMRDG A
|
|---|
| |