| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4133 |
|---|
| Symbol | |
|---|
| ID | 6179548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1172882 |
|---|
| End bp | 1173685 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641683903 |
|---|
| Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| Protein accession | YP_001810814 |
|---|
| Protein GI | 172063163 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.148585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.769633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTC CGTCCAATGT CTTCAAGGCC GCGCTCGCGC GCGGCGACGC GCAGCTCGGG
CTGTGGCTCG GCCTCGCGAA TCCGTACAGC GCGGAAGTCG TCGCGGGCGC CGGTTTCGAC
TGGCTACTGA TCGACGGCGA ACATGCGCCG AACACGGTGC CGACGATCCT CGCGCAGTTG
CAGGCGATCG CGCCGTATCC GTCGCATCCG GTCGTGCGCG TGCCGTGGAA CGATCCGGTG
ATCGTCAAGC AGGTGCTCGA TCTCGGCGCG CAGACGCTGC TCGTGCCGAT GGTGCAGAGC
GCGGACGAAG CGCGCGCGGC GGTGGCCGCG ACGCGTTATC CGCCGCACGG GATTCGCGGG
GTCGGCAGTG CGCTCGCGCG CGCGTCGCGG TGGAATCGCG TCGGCGATTA CCTGCACCGC
GCGAACGACG AGATGGCCGT GCTCGTGCAG GTCGAGACGC GCGCGGGGCT CGATGCGATC
GATGCGATTG CACAGGTCGA AGGCGTGGAC GGCGTGTTCA TCGGGCCGGC CGACCTGGCG
GCCGATCTCG GGCATCTCGG CAATCCGGGG CACCCGGACG TGCAGGCCGC GATCGACGGC
GCGATCCGCA CGATCAAGGC GGCCGGCAAC GCGCCGGGCA TTCTGAGCGC GGATGAGGCG
GCGGCGCGGC GGTATCTGGA AGCGGGGGCG CTGTTCGTCG CGGTCGGTGT GGATACGACG
CTGCTGGCGA GAAGTGCGCA GGCGCTGGCG GCGCGGTTCA AGGAGAAGGG CGAGGCCGGG
AAGGCGGGCG ACGGGACGTA TTGA
|
|---|
| Protein sequence | MQIPSNVFKA ALARGDAQLG LWLGLANPYS AEVVAGAGFD WLLIDGEHAP NTVPTILAQL
QAIAPYPSHP VVRVPWNDPV IVKQVLDLGA QTLLVPMVQS ADEARAAVAA TRYPPHGIRG
VGSALARASR WNRVGDYLHR ANDEMAVLVQ VETRAGLDAI DAIAQVEGVD GVFIGPADLA
ADLGHLGNPG HPDVQAAIDG AIRTIKAAGN APGILSADEA AARRYLEAGA LFVAVGVDTT
LLARSAQALA ARFKEKGEAG KAGDGTY
|
|---|
| |