| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4128 |
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| Symbol | |
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| ID | 6180109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1168476 |
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| End bp | 1169240 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683898 |
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| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit |
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| Protein accession | YP_001810809 |
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| Protein GI | 172063158 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR02303] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.247214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGG CACGCGTGAT CTACAACGGC GCACTGCATG CGGCCGAGCC GGCCGGCGAC
GGCGCGATCC GGCTCGACAC GGGGCGCGTG CTCGCCGAGC ACGACGTGAC GTGGCTGCCG
CCTGTCGCGC CGCGCACGAC CTTCGCGCTC GGTCTGAACT ACGCGGACCA CGCGAAGGAA
CTCGCGTTCA ACGCGCCGAG CGAGCCGCTG ATCTTCCTGA AGGGGCCGAA CACGTTCATC
GGCCACCGGT CGCGCACCGT GCGCCCGACG GATGCGACGC ACATGCACTA CGAGTGCGAG
CTGGCCGTCG TGATCGGCCG TCCGGCGCGC AACGTGAGCC GTGCGCGGGC GATCGACCAC
GTCGCCGGCT ACACGGTCGC GAACGACTAC GCGATCCGCG ACTATCTCGA GAACTACTAC
CGCCCGAACC TGCGCGTGAA GAACCGCGAC ACCTGCACGC CGCTCGGGCC GTGGTTCGTC
AGCCGCGACG AAATCGGCGA CGCGGGCGAC CTGATGCTGC GCACGACGGT CAACGGCCGG
GAGACGCAGC GCGGCAGCAC GCGCGACATG ATCTTCGACG TGCCTGCGCT GATCGAGCAC
ATCAGCGGCT TCATGACGCT CTCGCCGGGC GACCTGATTC TGACCGGCAC GCCGGAAGGG
CTCGCGGACA CGCAGCCGGG CGACGAGGTC GTGACGGAAA TCGAAGGGAT CGGCCGGCTC
GTGAACACGA TCGTCGGCGA AGCAGACTAC TATCGCGCCG GGTGA
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| Protein sequence | MKTARVIYNG ALHAAEPAGD GAIRLDTGRV LAEHDVTWLP PVAPRTTFAL GLNYADHAKE
LAFNAPSEPL IFLKGPNTFI GHRSRTVRPT DATHMHYECE LAVVIGRPAR NVSRARAIDH
VAGYTVANDY AIRDYLENYY RPNLRVKNRD TCTPLGPWFV SRDEIGDAGD LMLRTTVNGR
ETQRGSTRDM IFDVPALIEH ISGFMTLSPG DLILTGTPEG LADTQPGDEV VTEIEGIGRL
VNTIVGEADY YRAG
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