Gene BamMC406_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4117 
Symbol 
ID6179645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1152851 
End bp1154629 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content71% 
IMG OID641683887 
Productphosphotransferase domain-containing protein 
Protein accessionYP_001810798 
Protein GI172063147 
COG category[L] Replication, recombination and repair 
COG ID[COG1796] DNA polymerase IV (family X) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCC ACAATGCCGA GTGCGCGGCC GTATTCGCCG AAATCGCCGA CATGCTCGAG 
ATTCAGGGCG CGAATCCGTT CCGGGTGCGC GCCTATCGCA ACGCGGCCCG TACGATTGCC
GAGTACGGCC GCGACATTCC GGCGATGATC GCGAACGGCA GCGATCTCAG TCAGATTCCA
TCGATCGGCG CCGATCTCGC GGCGAAGCTG CGCGAGATCG CCGCGACCGG CACCTGCGAA
CTGCAGCAAA CGCTGCGCCA TGCGTTGCCG GGCGCGATCG TCGAATTGCT CGACGTGCCG
GGGCTCGGCG CGAAACGCGT GAAGGCGCTG CATGACGCAT TGCACGTCGA CTCGCTCGAA
CAGTTGCGCG CCGAAGCGAA GAGCGGGCAC GTGCGCGCGC TGCCGGGCTT CGGCGCGAAG
ACCGAAGCGC ATCTGCTCGA CGCGATCGAC GAGCGTCTGC AGCGCGAGCC GCAGCGCTTC
CTGCTGCCCG ATGCCGCGCA ATCGCTGCGG CCGATGCTCG AGCGGCTGCG CCAGGTGGCC
GGCGTCGGCG AGGCGGTGCC GGCCGGCAGT TTTCGGCGCT GCCGCGAGAC GGTCGGCGAT
CTCGACATCC TCGTGAGTGC ACAAGATGCG GCCGCGGTGG CCGACGCGTT CGTCAGCTGC
GGCGACGTCG TGCGCGTGCT CGCGAACGGC AAGACGCGTT CGAGCGTGAT GTTCGGCAAC
GGGCTGCAGG TCGACCTGCG CGTCGTCGAC GCCGACGCAT TCGGCGCGGC GCTAGTCTAT
TTCACCGGAT CGAAGGCGCA CAACATCGCG CTGCGCCGGA TCGCGCAGGC CGGCGGCCTG
AAGATCAACG AATACGGCGT GTTCCGTGGC GACGAGCGGA TCGCGGGCGC GACGGAGGCT
TCCGTCTACG AGGCGATCGG CCTTCGCTGG GTGCCGCCCG AACTGCGCGA GGGCCGCGGC
GAGATCGACG CGTCGCGCAC CGGCACGCTG CCCGCGCTGG TCGAGCGCAA GCATCTTCAT
GGCGATCTGC ACGCGCATAC CGACGCGTCG GCCGGGCGCG ACAGCCTGCG AGCGATGGCG
GATGCCGCCC GCGCGCGCGG GCTCGCGTAT CTGGCCATCA CCGACCGCAT GCCGGATGCC
GGCGGCGGCC GTACCGATTG CGACTGGCTC GTGCGACAGA TCGACGAGAT CGACCGCCTC
AACGCGTCGT TCGACGATTT CGTGCTGTTG AAGGGCGTGG AGGCCGGCAT TCGCGAGGAC
GGCAGCCTCG ATGTGCCCGA CGACGCGCTC GGCCGGCTCG ACCTCGTCGT CGGCGCGGTG
CGCGACGGCT TCGACCTGCC GGGCGACAGG CAGACCGAGC GGATCCTGCG CGCGATCGAT
CATCCGTATT TCACGATCCT CGCGCATCCG ACGGGCCGGC TGCTCGGCGA ACGCGACGCC
TGCGAACTCG ACGTGCCGCG CGTGCTCGCC GCGGCCGCCG CGCGCCGCTG CTTCGTCGAA
CTCGACGGCG ACCCGCGGCG GCTCGATCTG CCGGACCTGT GGTGCCGCGA GGCCGCGAAG
GCCGGCGTCG CGGTGGCGAT CGGCTCGGAC GCCCGCCGCG CGGACGATCT CGACAACCTC
GACTACGGTA TCGGCCACGC GCGGCGCGGC TGGCTCACGC GGCACGACGT GCTCAACACG
CGCACGCTCG CGCAACTGCG GCCGCTGCTG GCGCGCACGA TGGGTGGCGC GGGCAGCGCG
AGCGGCGCGT CGAAGCGCGA CCGCCCGAAG GGCGCGTGA
 
Protein sequence
MPIHNAECAA VFAEIADMLE IQGANPFRVR AYRNAARTIA EYGRDIPAMI ANGSDLSQIP 
SIGADLAAKL REIAATGTCE LQQTLRHALP GAIVELLDVP GLGAKRVKAL HDALHVDSLE
QLRAEAKSGH VRALPGFGAK TEAHLLDAID ERLQREPQRF LLPDAAQSLR PMLERLRQVA
GVGEAVPAGS FRRCRETVGD LDILVSAQDA AAVADAFVSC GDVVRVLANG KTRSSVMFGN
GLQVDLRVVD ADAFGAALVY FTGSKAHNIA LRRIAQAGGL KINEYGVFRG DERIAGATEA
SVYEAIGLRW VPPELREGRG EIDASRTGTL PALVERKHLH GDLHAHTDAS AGRDSLRAMA
DAARARGLAY LAITDRMPDA GGGRTDCDWL VRQIDEIDRL NASFDDFVLL KGVEAGIRED
GSLDVPDDAL GRLDLVVGAV RDGFDLPGDR QTERILRAID HPYFTILAHP TGRLLGERDA
CELDVPRVLA AAAARRCFVE LDGDPRRLDL PDLWCREAAK AGVAVAIGSD ARRADDLDNL
DYGIGHARRG WLTRHDVLNT RTLAQLRPLL ARTMGGAGSA SGASKRDRPK GA