Gene BamMC406_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4108 
Symbol 
ID6180956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1144124 
End bp1145179 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID641683878 
Producthypothetical protein 
Protein accessionYP_001810789 
Protein GI172063138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0619238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG TGTCCCGCGA CGGCGAGGAT GCGTCGTTCG AGGACGTGCG CCATCGCGCA 
CGCCATTACC GGCCGCACCC GCTGCACAGC CAGGAGATGG TCTGGAAACA GACCAACTGC
TATGTCGACA TGTGGCTCGA GGTGCTTCGG TGGTGGGGCC TGAATCCGTA CGCGGCGCTG
CCGTTTACGA TCGCGCTCGA TTTCGAGGGT GACCAGTTCA CGTTCTTCAA GTTTCCGCAC
GACGAGCTGG AGCGGCTCTA CGGGATCGTC GTGCAGGAGC ACTCGATCTA CGAACCGCTC
GACCAGCACA TCGAAACGCA GGTCGCGCGC GGCCACCTGA TGATCGTCGA GGTCGACGCG
TGGTTCCTGC CCGACACGCG CGGCAGCAGC TACCGCGCGC AGCATACGAA AACGACGATC
GGCATCGATG CGATCGATCG CACGCACCGC CAGATCGGCT ACTTCCACAA CAGCGGCTAT
TACGTGGCCG AGGATTTCGA CTACAACGGC CTCGTCGGCG GCGGCTCGCC GATGCCGCTG
CCGCCTTACG TCGAATGCGC GAAGCGCCGC TTCGCACCGC TCGACGAGCG CGTGCTGTGC
GACGTCTCGC TCGCGTCGCT GCAGCGGCAC TTGCGGCGCC TGCCGGTCGT CAATCCGATC
ACGGCGTTCC GGCGCCAGTT GCAGATCGAT ACGAAGTCGC TCGCCGATTC GCCGCTCGAA
CGCTTCCACG CGTACTCGTT CAATTCGGTG CGGCAACTCG GCGCGAACTT CGAACTGTTC
GGCCATTACA CGCGCTGGCT GCAGGCAAGT GGCTGCGTCG GGCCGTTCGC GGAGATTCGC
ACTGCCTGCG ACCGCATCGC ATCGGAGGCG ATGGTGCTGG AATTCCGGCT CGCGCGAGCC
TGCGCGCGCG GCAAGGAAGA ACGCGGCGAC GCGACGCTCG ACGCGATCGA AGCGGCTTAC
ACGGATCTGA TCGACTGCGC GCGGCAGATC GCCCCGCCGC TGCGGCATGC GCTGCCCGTT
CGCGTCGACG CGGCTCCCGT GCCGGTGATG CGGTGA
 
Protein sequence
MKFVSRDGED ASFEDVRHRA RHYRPHPLHS QEMVWKQTNC YVDMWLEVLR WWGLNPYAAL 
PFTIALDFEG DQFTFFKFPH DELERLYGIV VQEHSIYEPL DQHIETQVAR GHLMIVEVDA
WFLPDTRGSS YRAQHTKTTI GIDAIDRTHR QIGYFHNSGY YVAEDFDYNG LVGGGSPMPL
PPYVECAKRR FAPLDERVLC DVSLASLQRH LRRLPVVNPI TAFRRQLQID TKSLADSPLE
RFHAYSFNSV RQLGANFELF GHYTRWLQAS GCVGPFAEIR TACDRIASEA MVLEFRLARA
CARGKEERGD ATLDAIEAAY TDLIDCARQI APPLRHALPV RVDAAPVPVM R