| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4107 |
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| Symbol | |
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| ID | 6180377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1141647 |
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| End bp | 1144085 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641683877 |
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| Product | beta-mannosidase |
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| Protein accession | YP_001810788 |
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| Protein GI | 172063137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.653904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCAA CGGCCGCGGG CATCATGCGC GGCCCGCTCG ACCTCCCCGC CGACGGCTGG
ATCGCCGCCC CTGTCCCCGG CACGGTCGCG CAAGCGCTCG CGCTGGCCGG CCGGCATGAC
GATATGGCTT CGCTCGACGA GCGCGATCAC TGGTATCGCG TCGAACTGCG CGGACACGGG
CCGCGCGTGC TGCGCTTTCA CGGCCTCGCG ACGCTCGCCG ACGCATGGCT CGACGACACG
CCGATCCTGC GCTCGGGCAG CATGTTCGTC GCGCATGACG TGCGCGTGTC GCTCGACGGC
ACGCACCGGC TCACCGTCTG CTTCCGCGCC CTCGCGCCGC ACCTGCGCGA CGCGCGCACA
TCGCGCCGTG CACGCTGGCG CACGCGGCTG GCCGAACCGG CGACGCTGCG CACCGTGCGC
ACGTCGCTGC TCGGGCACAT GCCCGGCTGG TTTCCGCGCT GCGTGCCGAC CGGACCGTGG
CGGCCCGTCG ACGTGCTCGA CCCGGCCGAC GGTCCGGTTC TCGTCCAGTG CGACCTGCAT
GCGCGCCTCG ACGGCGACAC CGGCTGGCTC GATGCGGAGC TCGCGTTCGC CGCTCCGCTG
CCCGCTGCGT TCGCGGCCCG GCTGTCGTGC GGCGAGCACC ACGCGACGCT CGAACGCAGC
GGCGCTGACC GGCTGCGTGC GAGCGTCGCG GTGCCGAACG TGCGCCGCTG GTGGCCGCAC
ACGCACGGCG AACCGGTGCT CTACGACGTC GCGCTGCACA TCGGCGCCGA ATGTCGGCCG
CTCGGCGCGA CGGGTTTCCG CACGATCGAA CCGGACGCCG GCGACGACGG CAACGGGTTC
GGGCTGCGCG TGAACGGCGT GCGCGTGTTC GCGCGCGGCG CATGCTGGAG CAGCGCCGCC
CCGCTCGCGC TGCACGCGGA CGATGCGACC TATGCCCGTT TGCTCGGGTA CGCGCGCGAC
GCCGGCTTCA ACATGATTCG AGTCGGCGGC ACGATGACCT ACGAGGCCGA CGCATTCCAT
GCGTGGTGCG ACCGGCTCGG GCTGCTGGTC TGGCAGGACT TCATGTTCGC GAACTTCGAC
TACGCGCTCG ACGATCGCGC GTTCGCCGAC GCGGTCGATC GCGAAGCCGA ACAGTTCCTC
ACGCGCCACC GCGCGTCGCC GTCGCTCGCG GTGCTGTGCG GCGGCAGCGA GATCGCGCAG
CAGGCCGCGA TGTCGGGGCT CGCGCCGAAG CAGCGCTTCC TCGAACTGAC CGCCGAACGC
CTCGCCGGCC ATGCGGCGGC ACGCCGGCCC GACGCACTTT ACGTCCCCGA CTCGCCGGAC
GGCGGCGCAC TGCCGTTCCA GCCACGCGAG CGCGTGTCGC ACTACTACGG CGTCGGCGCA
TACCTGCGCC CGCTCGACGA CGCGCGCCGC GCCGACGTGC GCTTCGCGAG CGAATGCCTC
GCGTTCGCGA ACGTGCCGTG CGACGCGATG CTCGCGAGCC TCGGTTGGCC CGGCGTTCAC
GAGCCGCGCT GGAAGGCTGC GGTGCCGCGC GACCCCGGCA CGTCGTGGGA TTTCGACGAT
ATTCGGGACC ACTATCTAAA CACACTGTAC GACGTGGCGC CCGACCGCCT GCGACGCGAG
GATCCGTCGC GCTACTTCGA GCTGTCGCGC GCGGCGATCG CGGACCTGAT GCGCGACACC
TTCGCCGAAT GGCGGCGCAC CGGCTCGCGC TGCGCGGGAG CGCTCGTCTG GCAGTTCCAG
GACGTGATGC CGGGCGCCGG ATGGGGCTTG ATCGATGCGA CGCATCGGCC GAAATCGGCG
TGGTATGCGC TGCGCCAGGT GCTTCAGCCG GTGCAGGTCC TGCTCGTCGA CGAAGGGTTG
AACGGCCTCG ATGTGCACGT GATCAACGAA CGGCCGGCGC CGCTGTCGGC GGCCGTCGAG
CTGGTCGCGC TGCGCGACGG CCGCACACCG GTCGCGCGGG CCGGCGGGCC CGTCCGGATC
GCCGCGCACG ACACGGTGCG GCTCGGCTCG GCCGAATTGC TCGGCCGCTT CTTCGACTGG
ACCTACGCGT ATCGCTTCGG GCCGTGCGAG CACGACACCG TCGTCGCGAC GTTGCGCGCG
GACGACGGTA CGCTGCTGTC GCAGGCGTTC TACTTCCCGT CCCGCACGCA TCCTGCGGTG
TTCGCACGCC GCGAGCCCGG CATCGACGCA TGCGTGTCGC GCATTGGCGA TACGTGGTAT
GTCGACATCG GCACGCGCCA TGTCGCCCGT CACGTGCAGA TCGACGCGCC GGGCTTCGTG
CCGCTCGACG ACTGGTTCGA TCTCGCCCCC GGCACGCCGG CACACGTCGC GCTCGTGCCG
CTCGACGACA CGCGCGACCG GGCGGCGGCC GACACGCCGC CGAGCGTCGA TATCCGCGCG
ATCAACGCCG CACGCACCGT GCGCGCCGCG CCGGGCTGA
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| Protein sequence | MLATAAGIMR GPLDLPADGW IAAPVPGTVA QALALAGRHD DMASLDERDH WYRVELRGHG
PRVLRFHGLA TLADAWLDDT PILRSGSMFV AHDVRVSLDG THRLTVCFRA LAPHLRDART
SRRARWRTRL AEPATLRTVR TSLLGHMPGW FPRCVPTGPW RPVDVLDPAD GPVLVQCDLH
ARLDGDTGWL DAELAFAAPL PAAFAARLSC GEHHATLERS GADRLRASVA VPNVRRWWPH
THGEPVLYDV ALHIGAECRP LGATGFRTIE PDAGDDGNGF GLRVNGVRVF ARGACWSSAA
PLALHADDAT YARLLGYARD AGFNMIRVGG TMTYEADAFH AWCDRLGLLV WQDFMFANFD
YALDDRAFAD AVDREAEQFL TRHRASPSLA VLCGGSEIAQ QAAMSGLAPK QRFLELTAER
LAGHAAARRP DALYVPDSPD GGALPFQPRE RVSHYYGVGA YLRPLDDARR ADVRFASECL
AFANVPCDAM LASLGWPGVH EPRWKAAVPR DPGTSWDFDD IRDHYLNTLY DVAPDRLRRE
DPSRYFELSR AAIADLMRDT FAEWRRTGSR CAGALVWQFQ DVMPGAGWGL IDATHRPKSA
WYALRQVLQP VQVLLVDEGL NGLDVHVINE RPAPLSAAVE LVALRDGRTP VARAGGPVRI
AAHDTVRLGS AELLGRFFDW TYAYRFGPCE HDTVVATLRA DDGTLLSQAF YFPSRTHPAV
FARREPGIDA CVSRIGDTWY VDIGTRHVAR HVQIDAPGFV PLDDWFDLAP GTPAHVALVP
LDDTRDRAAA DTPPSVDIRA INAARTVRAA PG
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