| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4106 |
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| Symbol | |
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| ID | 6180376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1140209 |
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| End bp | 1141600 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683876 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001810787 |
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| Protein GI | 172063136 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.257345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGC CAATAACGCG CGATAAGAGC GCCGGCGCGG GGAGGACTTC CGGGCAGCGT
CCTCTGATTT ACTGGACGCA GTCGCCTTCC GTCATGCTTC GCAAGGAACT CGCGCGACGC
GACTGGAAAG TGACGATCGT CGCGCACGCG AGCGAGTTGC GCGACACCTC CGGCGAAATC
ACCTGCGGCA TCCTCGACCT GAGCGGCGGC CACGCCGACG CGATCGGCAG CATCGCGTCC
ACCTGCGCGT CGATGCGCGA TGTCGTGTGG GTCGCACTCG TCGAGACCGG TCAGACCGCG
TCGCCGAACG TGCGCGCGCT GTTGCGCGAC TATTGCTTCG ACTACATCAC GTTGCCCGCG
TCGCATCAGC GAATCGCCGA CACGGTTGGC CATGCGTACG GAATGGAATG CCTGTTCGCG
CGCGATCGCG AACGCCTCGA ATCGCAGGAG AACGGCATCG TCGGCACCTG CAGCGCGATG
CTGCGGCTGT TCGATACGGT GCGGCGTTTC GCGCGCACCG ACGCACCGGT GTTCGTGTTC
GGCGAGACGG GAACCGGCAA GGAACTGACG GCCGTCGCGA TCCATCGTCA TTCGGAACGG
CGCAACGGCC CGTTCGTCGC GGTCAACTGC GGCGCGATCC CGCCGCACCT GCTGCAATCG
GAACTGTTCG GCTACGAGCG CGGTGCGTTT ACCGGCGCGA ACGCACGCAA GGCCGGCTAC
GTCGAAGCCG CGAACGGCGG CACGCTGCTG CTCGATGAAA TCGGCGATCT GCCGCACGAG
AGCCAGGCGA GCCTGCTGCG CTTCCTGCAG GAGCGCGCGA TTCACCGCCT CGGCGGCAGC
GATCCTGTGC CGGTCGACGT GCGGATCGTT TCCGCGACGC ACGTCGACCT GCGCGAGGCG
ATGGAAGAAG GGCGGTTTCG CGCGGATCTG TTCCACCGTC TGTGCGTGAT GCGCATCGAC
CAGCCGCCGC TGCGTGCGCG CGGCAAGGAC ATCGAACTGC TCGCGCATCA CATGCTCGAA
CGCTTTCGCG GTGACGCGCG CCATCGCGTG CGCGGCTTCT CGACGGATGC GATCACGGCG
CTTTACAAGC ACGACTGGCC CGGCAATGTC CGCGAACTGA TCAACCGTGT GCGGCGCGCG
GTCGTGATGA CGGAAGGACG CCTGATTACC GCGCAGGATC TCGAGCTCGA ATACTGTCTC
GACGCGGCTT CGCCGTCCGT CGCCGACATC CGCAAGTCGA TCGAGCGCGA AGCGATCGAA
ACCGCGCTGC TGCGCACGCG CGGCCGCGTC GCCGCTTCCG CGCGCGAGCT CGGCGTGTCG
CGCGCGACGC TCTATCGCTG GATGGAAGCG TATGGCATCG AGCGGCCGCG CGGCACGGGG
TCGTCGGACT GA
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| Protein sequence | MNMPITRDKS AGAGRTSGQR PLIYWTQSPS VMLRKELARR DWKVTIVAHA SELRDTSGEI
TCGILDLSGG HADAIGSIAS TCASMRDVVW VALVETGQTA SPNVRALLRD YCFDYITLPA
SHQRIADTVG HAYGMECLFA RDRERLESQE NGIVGTCSAM LRLFDTVRRF ARTDAPVFVF
GETGTGKELT AVAIHRHSER RNGPFVAVNC GAIPPHLLQS ELFGYERGAF TGANARKAGY
VEAANGGTLL LDEIGDLPHE SQASLLRFLQ ERAIHRLGGS DPVPVDVRIV SATHVDLREA
MEEGRFRADL FHRLCVMRID QPPLRARGKD IELLAHHMLE RFRGDARHRV RGFSTDAITA
LYKHDWPGNV RELINRVRRA VVMTEGRLIT AQDLELEYCL DAASPSVADI RKSIEREAIE
TALLRTRGRV AASARELGVS RATLYRWMEA YGIERPRGTG SSD
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