Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4101 |
Symbol | |
ID | 6179775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1132549 |
End bp | 1133730 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683871 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001810782 |
Protein GI | 172063131 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.496207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGCG AGATCGAATC GCTGGACCCA AAGATGACCA CAGAAAAGAT CGTTCATATT GCCGAAGCGT TCGGTGGCGG CGTGCTGTCG ATGCTGACGC ATCTCGCCAA CCATGCCGCG GCAACCGGCG CCGACGTCAC GGTGCTGCAC TCGATCCGGG CGGAAACGCC GGTCGATTTT GCAATGCTGT TCCGGCCCGA CGTGAAGCTC GTCCATGTCG ACATGGTGCG CGAGGTCAGC GTCACACAGG ACCTGCGGAG TTTGCGCGCG CTGATCCGCA GCCTGCGCGA TTGCAAGCCG ACCGCGATTC ATCTGCATTC GTCGAAGGCC GGCGTGCTGG GACGGGTCGC CGCCCGGATC GCCGCGCCGA ATGCGACGGT CCTCTACTCG CCGCACGGGC TTTCGTTCCT GCGCTGCGAC GTGTCGCGCA TGAAGCAGTT CGCATATCTG AGCTTCGAAC GCATCGCGGC GCGAATCGGC GGCACCGTCG TCGCCTGCTC GGGCAGCGAG CTCGGCGAGA TCAGAAGAAA GGTCCGGCCG AAATCGGCGG TCCTGGTGGA AAACGGCGTC CATGTGGCGG AGATCCCGCC GCGTCGAACG CGTGACGATC GCAAGGTCGT CATCGGGATG AGCGGTCGCG CGTCGTTCCA GAAGAACCAT GAAGCATTCG TGCGCCTCGC CGACACGCTG CACGGCGTCG ACGTCGAGTT TCTGTGGATC GGCGGCAACG CGGCCGAGAT TGCGGATCCC GGCCAGCGCC CGGCCGTCGT CTGCAGCGGC TGGGTGACCC GCGCCCGGGC GCTGGCGCTC ACGTCCGAAC TCGACATCTA CGTGCAAACC TCCCGCTGGG AAGGCATGCC GGTCGCGCTG ATCGAAGCGC AGGTCGCCGG CATTCCGGCC GTGGTGACGG ACGTCGTCGG CAATCGCGAC GTGGTGATCC ACGGCGTGAC CGGTTACGTC GCGTCGAACG GTGACGAGTT GTCTGCATAC GTGGCCGTGC TCCGCGACAA CCGGCAGCTG CGCGAACAAA TGGGCGCCGC GGCCCGGCAA CGCGCGATCC AGCGGTTTTC GATCAACGCG ATCTTCCGGC AGTGGAATGC CCTCTACGGA CTCGGCGCCG ACGAGCCGCG AGCCGACACG CGCGACTTCG AGCCGGTTGC GCCGGATCAC GTCAAAGCGT GA
|
Protein sequence | MTGEIESLDP KMTTEKIVHI AEAFGGGVLS MLTHLANHAA ATGADVTVLH SIRAETPVDF AMLFRPDVKL VHVDMVREVS VTQDLRSLRA LIRSLRDCKP TAIHLHSSKA GVLGRVAARI AAPNATVLYS PHGLSFLRCD VSRMKQFAYL SFERIAARIG GTVVACSGSE LGEIRRKVRP KSAVLVENGV HVAEIPPRRT RDDRKVVIGM SGRASFQKNH EAFVRLADTL HGVDVEFLWI GGNAAEIADP GQRPAVVCSG WVTRARALAL TSELDIYVQT SRWEGMPVAL IEAQVAGIPA VVTDVVGNRD VVIHGVTGYV ASNGDELSAY VAVLRDNRQL REQMGAAARQ RAIQRFSINA IFRQWNALYG LGADEPRADT RDFEPVAPDH VKA
|
| |