Gene BamMC406_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4100 
Symbol 
ID6179774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1131445 
End bp1132521 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content62% 
IMG OID641683870 
Productglycosyl transferase group 1 
Protein accessionYP_001810781 
Protein GI172063130 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.17338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA GCAAACCGAA GCAACTCGTC TACAACGGCC GATTCACGAC GCAGAAGACG 
ACCGGCGTGC AACGCGTCGC GCGCGAGCTG ATCGCCGCAC TGATCAAGTT TCATCCGCAG
GATCCGGTGA CCGTGCTGGT GCCGCCACGG CCCGGCGTCG CGGTGAGCGG CGCCAAGACA
GTCGAAGTCG GCTTTTACAA AGGCGTGGTG TGGGAACAGC TGATCCTCCC GCTGTTCGCG
CGCCGCGGCC GCATCGTCAA TCTCGGCAAT TCGGCATCGA TCTTCCTCGG CAACCAGATC
ATCTACATGC ACGATGCGGC GGTGTTCGAC ACGCCCGCGC ATTTCTCCCG GCCGTTTCGG
ATGTGGTACC GGATCATGTT CTGGATCCTG GCGCGAACCT CGGCGTGCGT GCTGACCAAT
TCCCGGTTCT CGCGGGATCG TCTCGCCCAT CACTGCGGCG TTTCAGCGGA GAAGATCAGG
ATCGTGCCGC TCGGTGCGGA TCATCTCGAC GCGCTGGAAC CGGACACGAG CGTGCTCGAC
AAACATGCGC TGACGCCGGA TCGATTCGTG CTCGCGGTCA GCAGCATGAA TCCCACTAAG
AACTTCGGCC GGTTGATCGC CGCATTCCGG CAGATCGGCG ATCCGTCGGT CGATCTCGTG
ATCGTCGGGA TGCAGAACAC CACCGTGTTC AGCAAGCACG ACCCGGTTGG CGCGCCGGAG
CCGAACATCA AGTACGTCGG CTACATCAGC GACGAGCAAC TGAAGGCGCT GTATCAGAAC
GCGGCGTGCT TTCTCTATCC GTCGATCTAC GAAGGCTTCG GCATTCCGCC GCTCGAGGCG
ATGCGCTACG GCTGCCCGGC ACTGGTCGGA AACTCGACCG CACTGCCGGA AGTCTGTGCC
GATGCGGCGC TGTACTGCGA TCCGTATTCG CAGGATGACA TCGCGCGGAA ATTGCGTGGC
CTGCTCGATT CCCCCCAGCT CAGGGCCGAG CTCAAGCGCA AGGGAATCGC GCACGCGGCG
CAATATCGCT GGAGCCGCAG TGCCGAGATG ATGAAGGCGA TCTTCGAGAC GCTGTAG
 
Protein sequence
MIASKPKQLV YNGRFTTQKT TGVQRVAREL IAALIKFHPQ DPVTVLVPPR PGVAVSGAKT 
VEVGFYKGVV WEQLILPLFA RRGRIVNLGN SASIFLGNQI IYMHDAAVFD TPAHFSRPFR
MWYRIMFWIL ARTSACVLTN SRFSRDRLAH HCGVSAEKIR IVPLGADHLD ALEPDTSVLD
KHALTPDRFV LAVSSMNPTK NFGRLIAAFR QIGDPSVDLV IVGMQNTTVF SKHDPVGAPE
PNIKYVGYIS DEQLKALYQN AACFLYPSIY EGFGIPPLEA MRYGCPALVG NSTALPEVCA
DAALYCDPYS QDDIARKLRG LLDSPQLRAE LKRKGIAHAA QYRWSRSAEM MKAIFETL