| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4100 |
|---|
| Symbol | |
|---|
| ID | 6179774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1131445 |
|---|
| End bp | 1132521 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641683870 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001810781 |
|---|
| Protein GI | 172063130 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.17338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCA GCAAACCGAA GCAACTCGTC TACAACGGCC GATTCACGAC GCAGAAGACG
ACCGGCGTGC AACGCGTCGC GCGCGAGCTG ATCGCCGCAC TGATCAAGTT TCATCCGCAG
GATCCGGTGA CCGTGCTGGT GCCGCCACGG CCCGGCGTCG CGGTGAGCGG CGCCAAGACA
GTCGAAGTCG GCTTTTACAA AGGCGTGGTG TGGGAACAGC TGATCCTCCC GCTGTTCGCG
CGCCGCGGCC GCATCGTCAA TCTCGGCAAT TCGGCATCGA TCTTCCTCGG CAACCAGATC
ATCTACATGC ACGATGCGGC GGTGTTCGAC ACGCCCGCGC ATTTCTCCCG GCCGTTTCGG
ATGTGGTACC GGATCATGTT CTGGATCCTG GCGCGAACCT CGGCGTGCGT GCTGACCAAT
TCCCGGTTCT CGCGGGATCG TCTCGCCCAT CACTGCGGCG TTTCAGCGGA GAAGATCAGG
ATCGTGCCGC TCGGTGCGGA TCATCTCGAC GCGCTGGAAC CGGACACGAG CGTGCTCGAC
AAACATGCGC TGACGCCGGA TCGATTCGTG CTCGCGGTCA GCAGCATGAA TCCCACTAAG
AACTTCGGCC GGTTGATCGC CGCATTCCGG CAGATCGGCG ATCCGTCGGT CGATCTCGTG
ATCGTCGGGA TGCAGAACAC CACCGTGTTC AGCAAGCACG ACCCGGTTGG CGCGCCGGAG
CCGAACATCA AGTACGTCGG CTACATCAGC GACGAGCAAC TGAAGGCGCT GTATCAGAAC
GCGGCGTGCT TTCTCTATCC GTCGATCTAC GAAGGCTTCG GCATTCCGCC GCTCGAGGCG
ATGCGCTACG GCTGCCCGGC ACTGGTCGGA AACTCGACCG CACTGCCGGA AGTCTGTGCC
GATGCGGCGC TGTACTGCGA TCCGTATTCG CAGGATGACA TCGCGCGGAA ATTGCGTGGC
CTGCTCGATT CCCCCCAGCT CAGGGCCGAG CTCAAGCGCA AGGGAATCGC GCACGCGGCG
CAATATCGCT GGAGCCGCAG TGCCGAGATG ATGAAGGCGA TCTTCGAGAC GCTGTAG
|
|---|
| Protein sequence | MIASKPKQLV YNGRFTTQKT TGVQRVAREL IAALIKFHPQ DPVTVLVPPR PGVAVSGAKT
VEVGFYKGVV WEQLILPLFA RRGRIVNLGN SASIFLGNQI IYMHDAAVFD TPAHFSRPFR
MWYRIMFWIL ARTSACVLTN SRFSRDRLAH HCGVSAEKIR IVPLGADHLD ALEPDTSVLD
KHALTPDRFV LAVSSMNPTK NFGRLIAAFR QIGDPSVDLV IVGMQNTTVF SKHDPVGAPE
PNIKYVGYIS DEQLKALYQN AACFLYPSIY EGFGIPPLEA MRYGCPALVG NSTALPEVCA
DAALYCDPYS QDDIARKLRG LLDSPQLRAE LKRKGIAHAA QYRWSRSAEM MKAIFETL
|
|---|
| |