| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4096 |
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| Symbol | |
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| ID | 6179364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1125246 |
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| End bp | 1126469 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683866 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001810777 |
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| Protein GI | 172063126 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.512388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCA CCACGCAACC GGAATCGACG CTCGGGACGC CGCGGCCACG CACCGCAGGC
ATCCGGCGCG CGCCGTGGCT GTCGCGCATG GCGATCGTCG CGGCCGCGTG CGCGCTGAGC
GCATGTGCGT TGTCGCCGGG CATGAGCTAC CGGGCGCCTG CCGCGCGCGA CGCGAATGCG
CGCGTGAGCG CCGATGCATC GGGCGCGGGC GGCCTCGACG GCGTGCAGAA CGTGTCGAGC
GAGGATCTGA TCGAAATCAC GCCGGCGTTC GTCGCGCAGC ATGCGGGCCC GCGCACCGAT
GTCGACGCGG AGATCCGCCA GTTGTTCGGC AAGCCGAAGC CGTACGCGAT CGGCCCGGGC
GACGTGCTCG GCATCGTGGT CTGGGACCAC CCCGAATTGA ACCTGCCGAC GACGCAGACG
ACGGGCGGCG GCGACGGCGT CGGCGCCAGC TCGGTCGCGA CCGGCTATAC GGTCGACGCG
AACGGCAACG TGCAGTTCGC GTACGCAGGC CTCGTGCATG TCGCGGGGCT GACCGAGGCG
CAGGCGCGCG CGCTGCTGAC GAAGCGGCTC GGCGAATACG TGCGCAAGCC GCAGATCGCG
CTGCGCGTGC AGACCTACCG CAGCAAGCGC GTCTATCTGG ATGGCGAAGT GCGCACGCCG
GGTCTGCAGA TCGTCAACGA CATGCCGATG ACGCTGCCCG AGGCGATCGA CCGCGCGGGC
GGCTTCACCC CGACGGCCGA CCGCTCGCAG GTATCGGTGA CGCGCGGCGA CCGGACCGTG
AACGTGAGCC TGCCCGCGCT GATCGCCGCG GGCGTGAACC CGTCGAACAT CCTGCTGCGC
GACGGCGACC TCGTGCGCGT GCGCGCGGCG AGCGACGCGA AGGTATTCGT GCTCGGCGAG
GTGTCGCGAC CGGCGACGCT GACGCTGACC GACGGCCGGA TGAGCCTCGG CGAAGCGCTC
GGCGATACAG GCGGCGTGAG CCAGTACACG TCGGACGCGC GCCAGGTGTT CGTCGTGCGC
CGCGGCCCGG ACAACCGCCC GCGGGTGTAC CACCTCGACG GCAGTTCGCC CGCGTCGTTC
GCACTGGCCG ACCAGTTTCC GCTCCAGCGC CGCGACGTCG TGTTCGTCGA TGCGTCGTCG
CTGGTGCGCT GGAGCCGCGT CGTCAACCTG CTGATTCCGT CGTCCGCGCA GGGTGCGCTG
ACGGCCAGAG CCATCTCGCC GTGA
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| Protein sequence | MSITTQPEST LGTPRPRTAG IRRAPWLSRM AIVAAACALS ACALSPGMSY RAPAARDANA
RVSADASGAG GLDGVQNVSS EDLIEITPAF VAQHAGPRTD VDAEIRQLFG KPKPYAIGPG
DVLGIVVWDH PELNLPTTQT TGGGDGVGAS SVATGYTVDA NGNVQFAYAG LVHVAGLTEA
QARALLTKRL GEYVRKPQIA LRVQTYRSKR VYLDGEVRTP GLQIVNDMPM TLPEAIDRAG
GFTPTADRSQ VSVTRGDRTV NVSLPALIAA GVNPSNILLR DGDLVRVRAA SDAKVFVLGE
VSRPATLTLT DGRMSLGEAL GDTGGVSQYT SDARQVFVVR RGPDNRPRVY HLDGSSPASF
ALADQFPLQR RDVVFVDASS LVRWSRVVNL LIPSSAQGAL TARAISP
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