| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4093 |
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| Symbol | |
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| ID | 6179542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1120853 |
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| End bp | 1122112 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683863 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001810774 |
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| Protein GI | 172063123 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA TCAAGAAGAA CTTCCTGCTG CTGCTGACGT TGCAGATTTC GATGTACGCG
GTGCCGCTGC TGATCGCGCC GCTGCTGACG CACGCGCTCG GGCCGGAGGG TTACGGGCAG
CTCGCGTTCT CGCTCGCGGT CATCGCCTAC CTCACCAACT GCACGAGCTA CAGCTTCGAC
CTGACCGCGA CGCCGCGCAT CGCGCTCGCC CGCGACGACC GCGCCGAGCG CTCGCGCATC
TTCTGGGCGA CGCTGTACGC GCAGATCGGC ATCGCCGTGA TCTGCTTCGT CGTGCTGATC
GCGCTGACCT TTCTGGTCGA GCGCTTCGGC GAGGACCGCG ACCTGCTGCT GATCGGTTTC
GGAATGGTGG CCGGCGTGGC GTTCACGCCG GGTTGGTATT TCCAGGGCAT GGAGAAGCTG
CGCGCGCTGA GCGTGATCCT GTTCGTGGGC CGCATCCTGA GCCTGCCCGC GATGTTCGCG
CTCGTGCACA GCCCGGCGGA TATCGACCGC GCGATGATCG TCAACGCCGC CGTGCCGACG
CTGTCCGCGA TCGTGCTCGC CGCCTATCTG TATTTCCAGC GGGAAATCGA CTTCGTGCGC
GTCGGCGTCG CCGACATCGC CGAATCGCTG AAAGGCGGCT GGCAGGTGTT CCTCGCGTCG
ACGTCGATCG CGTTCTATGC GTCGACCAAC ACCGTGCTGC TCGGCTTCGT GTCGGGCAAC
GTCGCGGCCG GCTACTTCGC CGCCGGCGAC AAGCTGATCC GCGCGGCGCT CAGCATGCTC
CAGCCGCTGA AGGCCGCCAC TTATCCACGC ATCAGCTACC TGATGCGGCA CGCACGCAAC
GACGCGTTCT CGTTCCTGCG CAAGCTGTTC GTCGTGCAGG TCGTGATGGT GCTCGGCATC
TCGCTCGCGA TCTTCTTCGG CGCGCCGCTC GCGGTGCGCA TCCTGTATGG CCCTTCGTAC
GAACCGACGG TCCAGGTGCT GCGCTGGATG GCCTTCATTC CATTCATGGC CGGGATGACC
GACTTGTTTG GTGTGCAGAC GATGCTGCCG CTCGGCATGA AATCGGCGTT CACGCGGATC
CTGATGTCGT CGGGCATTCT GAACATCGTC CTGGTGCCCG TGCTCGCGAA GTACTTCGCG
GAACTGGGCG CGGCCGCCGC CGTGCTGACG GCCGAGGCCG CGGTTGCCGC GGCGCTCGCG
ACCGTCGTCT ATCGCGCCGG GATTCCGCTG CCCGGCAGCC CCGTCGCTCG ACGCAGCTAG
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| Protein sequence | MSNIKKNFLL LLTLQISMYA VPLLIAPLLT HALGPEGYGQ LAFSLAVIAY LTNCTSYSFD
LTATPRIALA RDDRAERSRI FWATLYAQIG IAVICFVVLI ALTFLVERFG EDRDLLLIGF
GMVAGVAFTP GWYFQGMEKL RALSVILFVG RILSLPAMFA LVHSPADIDR AMIVNAAVPT
LSAIVLAAYL YFQREIDFVR VGVADIAESL KGGWQVFLAS TSIAFYASTN TVLLGFVSGN
VAAGYFAAGD KLIRAALSML QPLKAATYPR ISYLMRHARN DAFSFLRKLF VVQVVMVLGI
SLAIFFGAPL AVRILYGPSY EPTVQVLRWM AFIPFMAGMT DLFGVQTMLP LGMKSAFTRI
LMSSGILNIV LVPVLAKYFA ELGAAAAVLT AEAAVAAALA TVVYRAGIPL PGSPVARRS
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