Gene BamMC406_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4084 
Symbol 
ID6180149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1111416 
End bp1111919 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID641683854 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 
Protein accessionYP_001810765 
Protein GI172063114 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCG CACCATTGAT CGACGCGCTG CATGGCGGCG CGGATATTCC CGTCGGCGAC 
GTGCGGGACG TGTTGCCGCA TCGCGGCACG ATGCTGCTGC TCGACGCGAT CGAGCGCTGC
TCGGAAACCG GCATCGAGGT CAGCGCGCTC GCGCGCCGCG ATGCGTGGTA TGTCGACGGC
AATGGCGCGA TGCCGGCGTG GATCGGCATC GAGCTGATGG CGCAGGCGAT CGCCGCGCAT
GTCGGCCTGC TCGCCGCGCA TGCGGGCGGC CGCGCGAAAC CGGGCGTGTT GCTCGGCGCC
AACCGCTATC TCGCGCATCG CACGGCGTTC GGCGCCGACA CGACGCTGCG CATCGTCGCG
CGGGAACTGC TGCGCGGCGA CGAGGGGCAT GGCGCGTACG AATGCGCGAT TCATGCCGAC
GGCGAGTGTT GCGCGGAAGC CGTCGTCAAG GTGTACCAAC CAAACGATTT TCAATCCTTT
ATCGAGGGGA GCTTCAATTC ATGA
 
Protein sequence
MDAAPLIDAL HGGADIPVGD VRDVLPHRGT MLLLDAIERC SETGIEVSAL ARRDAWYVDG 
NGAMPAWIGI ELMAQAIAAH VGLLAAHAGG RAKPGVLLGA NRYLAHRTAF GADTTLRIVA
RELLRGDEGH GAYECAIHAD GECCAEAVVK VYQPNDFQSF IEGSFNS