| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4079 |
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| Symbol | |
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| ID | 6181195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1105107 |
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| End bp | 1106729 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683849 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001810760 |
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| Protein GI | 172063109 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.463044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAGC ATGACATGAA GAACGTCCCG GCCTCCGCCG CGGCGGATGC GAGCCGGCCG
GCCGTCGTGA TCGGCGACCG CCATCTGACG ATCGAGGACG TCGTCGCGAT CGCCCGCGAT
GGTGCGCCGG TCGCGCTGAA TGCGGCGCCC GCGTGGCGCG CGCGGATCGA GCGCGGCGCA
ACCTGGCTGC GCGACTATCT CGCGAACGGC GGCACGCTGT ACGGTGTCAC GACCGGATAT
GGCGACGCCT GCGTGGTCGA GGTACCGCCG TCGCTCGTCG AAGCGCTGCC GCTGCAGCTG
ACCCGTTATC ACGGATGCGG GATGGGCGAC TGGTTCGATG CGACGCAGAC GTTGTCCATC
ATCGTCGCGC GGCTCAATTC GCTCGCGTTC GGTTACTCGG GCGTGCGGTT CACGTTGCTG
GAGCGGCTGG CCGATCTGGT GAATCACCGG ATCCTGCCGC GCATTCCGTC GGAAGGCTCG
GTCGGCGCGA GCGGCGACCT GACGCCGCTG TCCTACGTCG CCGCGGCGCT GGTCGGCGAG
CGCACCGTAT CGTTCGCCGG CGACGAGCGC GACGCGCGGG ACGTATGGCG CGCGATCGAT
CGCGCGCCGC TCACGCTTGC GCCGAAGGAA GGGCTGGCGC TGATGAACGG CACGGCGGTC
ATGACGGGGC TGGCCTGCCT CGCGTTCGCG CGTGCCGAGC ACCTGACGTC GATCGCTGCC
CGCCTGACGG CGTTGACGAC GGTCGCGCTC GACGGACGGG CGGGGCACTT CGATGCGCGC
TTGTTCGACG CGAAGCCGCA TGCGGGGCAG GCCGAGGCGG CCGCATGGAT ACGCGCCGAC
CTGGCCGGGC GCGACGAATT TCCGGGCCGG CGCCTGCAGG ATCGCTATTC GGTCAGATGC
GCGCCGCATG TGATCGGCGT GGCGCGCGAC GCGTTGTCGT GGATGCGTCG CGATATCGAG
AACGAACTGA ACAGCGCGAA CGATAATCCG CTGATCGATC CGGACGAAGG GTGCGTGCTG
CACGGCGGCA ATTTCTACGG CGGCCATATC GCGTTCGCGA TGGATGCGCT GAAGACCGCG
GTGGCGAACC TCGCGGACCT GATGGATCGT CAGCTCGCGC TGCTGGTCGA CGACAAGTTC
AGCAACGGAC TGCCGCGCAA CCTGACGGGG GCGACCGGGG AACGGGCCGC GATCAACCAC
GGGTTCAAGG CCGTGCAGAT CTCGTCTTCG GCATGGACGG CGGAGGCGCT GAAGCACACG
ATGCCGGCGA GCGTGTTCTC GCGCTCCACG GAGTCGCACA ACCAGGACAA GGTCAGCATG
GGAACGATCG CCGCGCGCGA TTGCCTGCGC GTGCTGGCGC TGACCGAGCA GGTCGCCGCG
GCGCACGTGC TTGCGACAGT GCAGGCCGTC CGTCTGCGGC TGCGCGACGA CCCGCGCACG
CAGCTTTCGC CCGCGCTGCG CGCGTTCATC GACGATGTGG ATCGCCAATC GCCACTGGTG
GTCGAGGACC GGCCGCTCGA AGCCGAGCTG CGCGCGTTGA CCGCGCGCCT GGCAGCCTGC
GAGCCGATTG GCGAGCCGAT TGGCGGATCG TTCGGCGCAT GCCGGCGCGG GGAGGCGGAA
TGA
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| Protein sequence | MAEHDMKNVP ASAAADASRP AVVIGDRHLT IEDVVAIARD GAPVALNAAP AWRARIERGA
TWLRDYLANG GTLYGVTTGY GDACVVEVPP SLVEALPLQL TRYHGCGMGD WFDATQTLSI
IVARLNSLAF GYSGVRFTLL ERLADLVNHR ILPRIPSEGS VGASGDLTPL SYVAAALVGE
RTVSFAGDER DARDVWRAID RAPLTLAPKE GLALMNGTAV MTGLACLAFA RAEHLTSIAA
RLTALTTVAL DGRAGHFDAR LFDAKPHAGQ AEAAAWIRAD LAGRDEFPGR RLQDRYSVRC
APHVIGVARD ALSWMRRDIE NELNSANDNP LIDPDEGCVL HGGNFYGGHI AFAMDALKTA
VANLADLMDR QLALLVDDKF SNGLPRNLTG ATGERAAINH GFKAVQISSS AWTAEALKHT
MPASVFSRST ESHNQDKVSM GTIAARDCLR VLALTEQVAA AHVLATVQAV RLRLRDDPRT
QLSPALRAFI DDVDRQSPLV VEDRPLEAEL RALTARLAAC EPIGEPIGGS FGACRRGEAE
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