| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4077 |
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| Symbol | |
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| ID | 6179627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1101726 |
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| End bp | 1103417 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683847 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001810758 |
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| Protein GI | 172063107 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGC TGCACGAGAT GCTGTGTGCC GCGGCGGATA GCGAAACGAC AGTCTGCCGC
GACGGCACCG AGACGCTGAC GCTGGGCGAT CTGCGCGCGC GCGTGGACGC CATCGCCCGG
ACGCTCGACG CGAGCGGCGC GCGACGGGTC GCGATCTGCA CGGACGATCC GTACGACTTC
GCGTGCGCCT TCTTCGCGGT CGCGGCGGTG AAGGGCGAAA TCGTGATTCC GGCCAGCAAC
GCGCCCGGCT ATCTCGGCGA TCTGGCCCAT GCATACGACC TGGTGCTGGA TGCGTCGGCA
TTGGCCGCGT GCGGGCTCGA CGCGGAGCGC GAATCTGCCA TCTCCGTTCG CCCGATCGAC
GCGACGGCCG CGGTGACGCT CTATACGTCC GGCAGCAGCG GCATCGCGAA GCCGGTGCGG
AAGTCGCTCG CGCAGCTCGA TGCCGAAGTG CGCACGCTGC AGCGCGAATG GGCCGACCGG
ATCGGCGCGG CAGTGACGCT GTCGAGCGTG CCGCATCACC ACATCTACGG ACTGCTGTTC
AGAATCCTGT GGCCGTTGGC GGCGGGCCGC GCGTTCGACC GGACAGCGGT GCTCGAACCG
TTGCAACTGC AGCAGCGGCT TGTCGAATAC GGCGGCGGTG TCGTGGTCTC GACGCCGTCG
CAACTGATGC GCTGGCCGGC GTTGTCCGGT TTTCCGATGC AAGCGCCCGC GCCGTGCGCG
TTCTTCTCGT CGGGCGGCCC GCTGCCGGCC GATGCGGCAG CGGCCTATGC GAACGCGTTC
GGCGCCGCGC CGCTCGAGAT CTTCGGCAGC ACCGAAACCG GCGGCATCGC ATGGCGGCGT
CAGGACGTCT CGCACGCATG GCAGCCGTTG AAGGGCGTCG AGGTGCGCTG CGACGACGAA
GGTGTCCTGT GCGTTCGGTC CGCGCATCTC GGCCACGATC GCTGGCACCG CACCGACGAC
ACCGCGCGAT TCGACGCGCG GGGCCGCTTC GCGCTCGCGG GACGGCGCGA TCGCGTGATC
AAGCTCGATG GCAAGCGCGT GTCGTTGCCG GAGCTCGAGA CGCGGATACT CGCGCACGAG
TATGTGGAGC AGGCAGCCGC GGTGGTCGTC GACGGTGCGA CGCGGTCACA CGTGGGCGTC
GTCGCGGTGT TGAGCGCGGC GGGGCGGGAC GCGCTGGCGG AGCACGGGCG GATTGCCGTT
GCCACGACGT TGCGGCATGC GCTCGGTGCG TATTTCGATG CGGCCGCGTT GCCGCGCTAT
TGGCGATTCC GCCACGCGAT GCCGTTCGAT GTGCGCGGGA AGCTGCCGGC CGCCGCGCTG
GCGGCGGCCT TTACGGCCAC GCCGGAGGGC TTCGAGCTGC TCGCGTCGTG GCGCAGCGAC
GACGCGTTGC ATTACGAGCT GCGCGTGCCG CCCACGCTCG CGCATTTCGA CGGGCATTTT
CCAGGGCTGC CCATCCTGCC CGGGGTCGTG CAGATCGACT GGGCCGCGCG CCTTGCCGGC
CGCGAGATGC CGACCGTGCG GGAAATCCGT TCGATCGAAC ACCTGAAGTT CAAGGCACCC
GTGCCGCCCG GCGCCGTGCT GGCGCTGCGT CTCGCGCATG ATCCGGTACG TGGCCACACG
CGCTTCGCGT TCCGGTGCGA TGGCCGGGAA TGCACGTCGG GCGTGCTGGT ATACGGCGCG
GCGGCGGCAT GA
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| Protein sequence | MIALHEMLCA AADSETTVCR DGTETLTLGD LRARVDAIAR TLDASGARRV AICTDDPYDF
ACAFFAVAAV KGEIVIPASN APGYLGDLAH AYDLVLDASA LAACGLDAER ESAISVRPID
ATAAVTLYTS GSSGIAKPVR KSLAQLDAEV RTLQREWADR IGAAVTLSSV PHHHIYGLLF
RILWPLAAGR AFDRTAVLEP LQLQQRLVEY GGGVVVSTPS QLMRWPALSG FPMQAPAPCA
FFSSGGPLPA DAAAAYANAF GAAPLEIFGS TETGGIAWRR QDVSHAWQPL KGVEVRCDDE
GVLCVRSAHL GHDRWHRTDD TARFDARGRF ALAGRRDRVI KLDGKRVSLP ELETRILAHE
YVEQAAAVVV DGATRSHVGV VAVLSAAGRD ALAEHGRIAV ATTLRHALGA YFDAAALPRY
WRFRHAMPFD VRGKLPAAAL AAAFTATPEG FELLASWRSD DALHYELRVP PTLAHFDGHF
PGLPILPGVV QIDWAARLAG REMPTVREIR SIEHLKFKAP VPPGAVLALR LAHDPVRGHT
RFAFRCDGRE CTSGVLVYGA AAA
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