Gene BamMC406_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4072 
Symbol 
ID6181012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1099093 
End bp1099788 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID641683842 
Producthypothetical protein 
Protein accessionYP_001810753 
Protein GI172063102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.175632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT TGCATTGGAC CATGCCAATC GCCAGATGGA CGTCGATTTC GACCGCGGGG 
GTGCCGGGCG TCGAAGCCCT CGATCCGATG GTGCGTCGCC GCTTGAGCCG GCTGTCGCGT
CTCGCGCTTC AGGCTGCGTA TGACTGCGCC GGAGCGGAAA ATCCATTGCG GATGGTATTC
GCGTCGCGCC ATGGCGAACT GACGCGCACC ACCGGCATTC TCGCCGACAT CGGCGCCGCG
GAACCCGTCT CTCCGACGGC CTTCAGTCTC TCCGTTCTCA ATGCGGTCAC GGGCATATTC
GGGATCGCAA GGCGCGACCG ATCGCCCGCG ACCGCGATCG CGGCCGGCCA TGAAACCCTC
GGCTACGGGC TGCTCGAAGC ATTTACCCAA TATGACACGT CGCCGGCATC GCCGGTGTTG
CTCGTCCATG CGCACGAGCC GGCCGACCCA GTATACGGCG ATGTCGACGA CGACCCGGAG
AGCGTCGGGC TTGCCGTGCT GCTTGGCGCC GATGAGCCGG TCGGCTATCT GACCTGCGAA
ATGGAGATCG ACGGCGCGAG CGACACGCAC GTTGCCGACG ACGCGGCGAG TACGCAAAGC
GCGGCAGTGC TGCGCTGCCT GTCGGCGCGC ACGCCGGTGT CATGGCGTGG CGAACACGCA
TTGTGGCGAT GGAGCTGGCA TGATCGCGCG GCTTGA
 
Protein sequence
MADLHWTMPI ARWTSISTAG VPGVEALDPM VRRRLSRLSR LALQAAYDCA GAENPLRMVF 
ASRHGELTRT TGILADIGAA EPVSPTAFSL SVLNAVTGIF GIARRDRSPA TAIAAGHETL
GYGLLEAFTQ YDTSPASPVL LVHAHEPADP VYGDVDDDPE SVGLAVLLGA DEPVGYLTCE
MEIDGASDTH VADDAASTQS AAVLRCLSAR TPVSWRGEHA LWRWSWHDRA A