| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4071 |
|---|
| Symbol | |
|---|
| ID | 6181011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1098201 |
|---|
| End bp | 1098788 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641683841 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001810752 |
|---|
| Protein GI | 172063101 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1739] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0233425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTATT CGCTCGCAAC CGAATACACC CGCGAGCTCG AAATCCGCAA GAGCCGCTTC
ATCGCACATG CGATCCCCGT CGACGACCGC GACGCCGCGA TGCAGGCGCT GCAGCGCCTG
CGTGACGCGC ACCCCGCGGC CACCCACGTC TGCTGGGCGC TGCTCGCGGG CGGCCAGTCC
GGCATGTCGG ACGACGGCGA GCCCTCGGGC ACGGCCGGCC GACCGATCCT CGAGGTGCTG
CGTCATCACG ATCTCGACGG CGTGCTCGGC GCGGTCGTCC GCTACTACGG CGGCGTGAAG
CTCGGCGCAG GCGGCCTGGT GCGTGCCTAT ACGGACGCGA TCGCCTCCGC GCTGCTCGAC
GCCGAGCGCA TCGAACGCAT TCGCCACACG CGGTTCGCGA TCGAAATCGG CTATCCGGAC
GAAGCGCGCG TGCGCCGCTG GATCGAGCAG GCGGGTTACG AACTGGCGGA CAGTGCGTAC
GGGATGACGG TGAAGCTCGT GATCAAGCTG CCAGAAACTG CCGAAGCGAC GGCGAAAGCC
GAGCTGTTCG ACCTGACGCA GGGGCGTTCG GGCTTCCCTG ACCTGTGA
|
|---|
| Protein sequence | MSYSLATEYT RELEIRKSRF IAHAIPVDDR DAAMQALQRL RDAHPAATHV CWALLAGGQS
GMSDDGEPSG TAGRPILEVL RHHDLDGVLG AVVRYYGGVK LGAGGLVRAY TDAIASALLD
AERIERIRHT RFAIEIGYPD EARVRRWIEQ AGYELADSAY GMTVKLVIKL PETAEATAKA
ELFDLTQGRS GFPDL
|
|---|
| |