Gene BamMC406_4069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4069 
Symbol 
ID6180140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1096715 
End bp1097665 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content63% 
IMG OID641683839 
Producthypothetical protein 
Protein accessionYP_001810750 
Protein GI172063099 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00361553 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGACA ACGATACCCG CACCGAGACC GACAACGCCA CCGATATGGC GTCGGGCGAG 
TCGCGCCGGC ACCATTTCGA GGAAGACCTC GTCGATGCGT ACGACGAAGA ACTCGAAATG
GAACTTGACG ACCGCCGTTT CGATAGCGGC GAGGATCTGC TGTTCTCGCC GGAGCGCCGC
GAAGCGCGCA AGCAGTATTT CCGCGAGCTG TTCCGGCTGC AGGGCGAGCT CGTGAAGCTG
CAGGACTGGG TCGTGAGCAC GGGGCATCGC CTCGTCGTGA TTTTCGAGGG GCGCGACGCG
GCAGGCAAGG GCGGCGCGAT CAAGCGCATC ACGCAGCGCC TGAACCCGCG CGTGTGCCGC
GTGGCGGCGC TGCCCGCGCC GAACAACCGC GAGCGCACGC AATGGTATTT CCAGCGCTAT
GTCGCGCATC TGCCGGCCGG CGGCGAAATC GTGCTGTTCG ATCGCAGCTG GTACAACCGC
GCAGGCGTCG AGCGCGTGAT GAATTTCTGT ACCGATGACG AGTACGAGGA ATTTTTCCGT
TCGGTACCCG AATTCGAGAA GATGCTGGTG CGCAGCGGGA TCCAGATCGT CAAGTACTGG
TTTTCGATCA CAGATCGCGA GCAGGAAGTG CGCTTCCAGA GCCGGATCCA GGATCCGCTG
AAGCAGTGGA AGCTGAGCCC GATGGATCTG GAGAGCCGCC GCCGCTGGGA AGCCTATACG
GCCGCGAAGG AAGAAATGCT GCAGCGCACG CATATCCCCG AAGCGCCGTG GTGGGTCGTG
CAGGCGGTCG ACAAGAAGCG CGCGCGCCTG AACTGCATCA GCCATCTGCT GACCCAGGTG
CCGTATCACG AGGTGCCGCG CCCGACGATC GATCTGCCGC AGCGCGAGCA TCACGAGGAC
TACATTCGGC GTCCGGTGCC GGACAGCATG ATCGTCCCGG ACGTTTATTG A
 
Protein sequence
MGDNDTRTET DNATDMASGE SRRHHFEEDL VDAYDEELEM ELDDRRFDSG EDLLFSPERR 
EARKQYFREL FRLQGELVKL QDWVVSTGHR LVVIFEGRDA AGKGGAIKRI TQRLNPRVCR
VAALPAPNNR ERTQWYFQRY VAHLPAGGEI VLFDRSWYNR AGVERVMNFC TDDEYEEFFR
SVPEFEKMLV RSGIQIVKYW FSITDREQEV RFQSRIQDPL KQWKLSPMDL ESRRRWEAYT
AAKEEMLQRT HIPEAPWWVV QAVDKKRARL NCISHLLTQV PYHEVPRPTI DLPQREHHED
YIRRPVPDSM IVPDVY