| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4065 |
|---|
| Symbol | |
|---|
| ID | 6181059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1087684 |
|---|
| End bp | 1088958 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641683835 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001810746 |
|---|
| Protein GI | 172063095 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCGC ATGCCGATTC GCCCGCCGTT CATCACGCGG GCTCGCTGAC GATTTTCCAG
GGCGCCGCGC TGTATATCGG CGCGGTGCTC GGCACCGGCG TCATTGCGTT GCCCGCGCTC
GCCGCCGAGG TCGCGGGCCC GGCATCGCTG CTCGCGTGGG CCGCGCTCGT CGTGCTGTCG
GGGCCGCTCG CGGCCACCTT CGCCGCACTC GGTGCGCGCT ATCCGGACGC GGGCGGCGTA
TCGACCTACG CGCGACGTGC ATTCGGGCCG AAGGCCGCGG CGATCGTCGG CTGGTGTTTC
TATTTCGCGG TGCCGGCCGG CGCGCCGGCC GCCGCAATGT TCGGCGGCGC GTATGTCGCG
GCCGTCACGG GCGGCGGGCA TGCCACCGTC ATCGTCACGG CCGCCGCCTT GATTGCCACG
GTGTCGGCAG CGAATGCATT CGGCGTGACG GTGTCCGGTC GCATGCAGCT CGTGTTGTCG
GCACTGCTCG TCACGCTGCT GCTGGCCGCG GTGCTCGCGT CCGCGCCGCA TGCGCGCACC
GCGAACCTGC ATCCGTTCGC GCCGCACGGC TGGCTGGCGG TCGGTCAGGC TGCAGCACTG
CTGGTATGGA GCTTCGCGGG CTGGGAAGCG ATCACGCACC TCGCGGCCGA ATTCCGACGC
CCCGCGCACG ACATGCCGCG CTCGGCCGCC ATCGCGGTCG TGGTCGTCGG ATTCCTGTAT
CTGTCGGTCG CGGCCGCGAG CGTGACGGTG CTCGGGCCGT CGGCCGGCGC ATCGGGTGCG
CCGCTCGCGG AACTGATCGC GGGCGGCATC GGCGGTCACG CGCGGGTGCT GGCGGCCACG
GCCGCGGTGC TGCTCACGCT CGGCACGATG AACGCCTATT TCGCGGGTGC GGCCAAACTC
GGCGCGGCGC TCGGGCGCGA CGGCGCGCTG CCCGCGTGGC TCGCGCAAGG CAGCCAGGTC
GGTGGCGTGC CGCGCCGCAG TCTCGGCGTG ATCGCGGTGC TGGCGGCCGT GGCGCTCGCG
GCAACGACGA TCTCGGACGT CGGGCCGAAA CCGCTCGTGC TCGTCACGTC GGGTTGCTTC
GTGATGGTGT ACGGGCTCGG CGCGGCCGCG GCGCTGAAAC TGCTGCCGCG TGGCGGCATC
GCGTACCGCT GCGCGTGGAT TTCGCTGGTC GCCGTCGCCG GGCTGTTTCT GACGACGGGA
TGGTATATCT TGTGCCCGCT GCTGCTCGCG GGCGGCGCGT TGCTGTATCT GTGGATGGCC
GGGCCGCGCA CATGA
|
|---|
| Protein sequence | MPSHADSPAV HHAGSLTIFQ GAALYIGAVL GTGVIALPAL AAEVAGPASL LAWAALVVLS
GPLAATFAAL GARYPDAGGV STYARRAFGP KAAAIVGWCF YFAVPAGAPA AAMFGGAYVA
AVTGGGHATV IVTAAALIAT VSAANAFGVT VSGRMQLVLS ALLVTLLLAA VLASAPHART
ANLHPFAPHG WLAVGQAAAL LVWSFAGWEA ITHLAAEFRR PAHDMPRSAA IAVVVVGFLY
LSVAAASVTV LGPSAGASGA PLAELIAGGI GGHARVLAAT AAVLLTLGTM NAYFAGAAKL
GAALGRDGAL PAWLAQGSQV GGVPRRSLGV IAVLAAVALA ATTISDVGPK PLVLVTSGCF
VMVYGLGAAA ALKLLPRGGI AYRCAWISLV AVAGLFLTTG WYILCPLLLA GGALLYLWMA
GPRT
|
|---|
| |