| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4056 |
|---|
| Symbol | |
|---|
| ID | 6181408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1080334 |
|---|
| End bp | 1081161 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641683826 |
|---|
| Product | peptidase M55 D-aminopeptidase |
|---|
| Protein accession | YP_001810737 |
|---|
| Protein GI | 172063086 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2362] D-aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC TGATCTCGAC CGACATCGAA GGCGTCGCCG GTGTGTTCGC CGTCGAGCAG
ACGCGGGCCG GCAATCCGGA GTACGAACGT GCGCGCCGCT GGATGACCGC CGAGGCGAAC
GCGGCGATCG AAGGTGCATT CGCGGGCGGC GCGCAGGCCG TGTGGGTCAA CGACTCGCAT
GGCGGCTTTC GCAATCTGCT GCCCGACGGG CTCGATGCGC GTGCGCGCGT CGTGCTCGGC
AAGCCGCGCA CGCTCGGGAT GATGGCGGGC CTCGAACAGC AGCCCGATCT CGTGTTCATG
ATCGGCTTTC ACGCGAAATC GCAGACGTAC GGCGTGCTCG CGCATACGAT CAACAACTTT
GCGTTCACGC AGGTGTGGCT GAACGGCGTC GAACTCGGCG AAGCCGGGCT GTACGGCGCG
CTGGCGCGCG AATACGGCGC GCACGTCGCG CTGGCGTCGG GCGACGACGT GTTCGCCGAG
GAAACCCGGC CGCTGTTTCC GGACGCGCGT TTCGAGACGG TCAAGACGGC CCGCGGCGCA
TCGAGCGGCG ACACGCTCAC GCCGGCCGCG TCCTGCGCAC GCATCGCGAC CGCCGCACGC
GAAACGGTCG CGCATGCGCT GTCGTCCGGC TGGCGCGCGA CCGCGCACCG GCCTGCGGCG
GCCGCTTGCA CGCTGCGCGT GCAGACGGCC GCGCTCGCCG ATCTGTTCTG CATCCTGCCG
ACGCTCGAGC GCGTCGATGC GGTGACGTTG CGCTTCGACG GGCCGTCGGT CGAGCACGTG
GTGCGCACGT TGAACAGCCT GTCGGCCATG TCGTTCATGC TGCGGTGA
|
|---|
| Protein sequence | MKILISTDIE GVAGVFAVEQ TRAGNPEYER ARRWMTAEAN AAIEGAFAGG AQAVWVNDSH
GGFRNLLPDG LDARARVVLG KPRTLGMMAG LEQQPDLVFM IGFHAKSQTY GVLAHTINNF
AFTQVWLNGV ELGEAGLYGA LAREYGAHVA LASGDDVFAE ETRPLFPDAR FETVKTARGA
SSGDTLTPAA SCARIATAAR ETVAHALSSG WRATAHRPAA AACTLRVQTA ALADLFCILP
TLERVDAVTL RFDGPSVEHV VRTLNSLSAM SFMLR
|
|---|
| |