| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4048 |
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| Symbol | |
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| ID | 6180510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1070073 |
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| End bp | 1071344 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683818 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001810729 |
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| Protein GI | 172063078 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0187179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.633628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACAG TCAAGGCGTT GCGCTGGTGG ATCATCGTGC TGGTATGTCT CGGCACGATC
CTCAACTATC TCGCACGAAA TTCGCTCGCG GTGCTCGCGC CGGAACTGAA GCACGTGTTC
GCGATCTCGA CGCAGCAGTA CTCGTACATC GTCGGCGCGT TCCAGATCGG CTACACGATC
ATGCAACCGG TGTGCGGATT CATCGTCGAC CTGATCGGGC TGCGGCTCGG CTTCGCGCTG
TTCGCGATGC TGTGGTCGGT GGTCGGCGTC GCGCACGGCT TCGCGTCGGG CTGGCTGTCG
CTCGGCATCC TGCGCGGGCT GCTCGGGCTG TTCGAGGCCG CGGCGATTCC GTCGGGAATG
AAGGCCGTCG CCGAATGGTT TCCCGATCGC GAGAAATCCG TCGCGGTCGG CTACTTCAAC
GCGGGCACGT CGCTCGGCGC CGCGATCGCG CCGCCGCTCG TCGTGTTCCT GTCGATGCGG
TTCGGCTGGC AATCCGCGTT CATGGTCACC GGCGCGCTCG GCTTCGCGTG GGCCGTGCTC
TGGTACACGC AGTATCGGTC GCCGGCCGAG CATCCGCGCA TTTCGTCGCA GGAGCGCACG
CTGATCAGTG ATGGCCAGGC CAGGATGCCG GCCGTGTCGA AGCGCCGGAT TCGCGACGTC
GTCACCGCGC GCCGCTTCTG GGCGATCGCG CTGCCGCGCT TCTTCGCGGA ACCGGCATGG
CAGACCTTCA GCTTCTGGAT TCCGCTGTAT CTCGCGACCG AACGCCACAT GGCGCTCACG
GAGATCGCGA TCTTCGCGTG GATGCCGTTC CTCGCCGCTG ACCTCGGCGG CATCGCCGGC
GGCTACCTGT CGCCCTACCT CGCGAAACGG TTCAGTCTGC CGCTCGTATG GTCGCGGGTC
GCGGGCGTCG CGCTCGGCGC GGTGCTGATG CTCGGGCCGG CGACGATCGG GCTCGTGTCG
TCGCCGTACA TGGCCATTGC ACTGTTCTGC GTCGGCGGCT TCGCGCACCA GATGATCTCC
GCACTCGTCA ACACGCTGTC GGCCGACGTG TTCGACTCCG AGGAAGTCGG CACCGCCAGC
GGCTTCGCGG GAATGGCTGC GTGGATCGGC GGGCTCGGCT TCTCGCTGCT GGTCGGCGCG
CTCGCCGACA AGATCGGCTA CGCGCCGCTG TTCGCGTGCC TCGGCCTGTT CGACATCATC
GGCGTCACGC TGCTCGCGGT GCTGATCCGC GGGCAGTCGA AGCAGGAACG CCTGCTCGCG
CAGCATGCCT GA
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| Protein sequence | MKTVKALRWW IIVLVCLGTI LNYLARNSLA VLAPELKHVF AISTQQYSYI VGAFQIGYTI
MQPVCGFIVD LIGLRLGFAL FAMLWSVVGV AHGFASGWLS LGILRGLLGL FEAAAIPSGM
KAVAEWFPDR EKSVAVGYFN AGTSLGAAIA PPLVVFLSMR FGWQSAFMVT GALGFAWAVL
WYTQYRSPAE HPRISSQERT LISDGQARMP AVSKRRIRDV VTARRFWAIA LPRFFAEPAW
QTFSFWIPLY LATERHMALT EIAIFAWMPF LAADLGGIAG GYLSPYLAKR FSLPLVWSRV
AGVALGAVLM LGPATIGLVS SPYMAIALFC VGGFAHQMIS ALVNTLSADV FDSEEVGTAS
GFAGMAAWIG GLGFSLLVGA LADKIGYAPL FACLGLFDII GVTLLAVLIR GQSKQERLLA
QHA
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