| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4046 |
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| Symbol | |
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| ID | 6180591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1066311 |
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| End bp | 1067507 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683816 |
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| Product | porin |
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| Protein accession | YP_001810727 |
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| Protein GI | 172063076 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.565887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.186391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAT CGCACTACCC GCACTGTCGT TTTGCAATCC TGATTTTATC GGCCGCCGCG
TTCGGCGCCG GCGCAGCGCA TGCGCAGAGC AGCGTGACGC TGTACGGCGT GGTCGACGAT
TCGATCGCGT ACGTGAACAA CCAGCAAGGC CACTCGAACG TGTACCTGCG CGACGGCAAC
CTGTATGCGT CGAAGTTCGG GCTGCGCGGC GACGAGGATC TCGGCGGCGG CACGCACGCG
ATCTTCGATC TGCAATCCGG CTTCAACCTG AACACCGGCG CGCAAGCGGC CGCCGGCACG
ATCTTCAACC GCCAGGCCTA CGTCGGGCTG CGCAACGACC ATTACGGCAC GGTGACGGCC
GGTCGCCAGT ACACGCCGTA CTTCCTGCTG GTCGGACCAT ACGCGTCGAG CAACTGGCTG
ACCGGCGCGA CCGGCGCGCA TCCGGGCGAT ATCGACGGCC TCGACACGAC GATCCGCGTG
AATAACTCGG TTACCTATAC GTCGCCGACC CTCTCGGGGC TGACCGCGAG CGCGATGTAT
GCGTTTGGCG GCATCGCCGG CGCGACCGGC AAGGGCAACA CGTTCAGCGC GGCGCTGCGC
TATGCGAACG GGCCGGTCGG GATCGCGGCC GGCTACCTGC GCATCAACAG CTCGGGTTCG
TCGGCCGGCT TCCTGAATCC GGCGACCGCG GCATCGGGCA GCTTCGCGGT GTCCGTGCTG
AACCAGGGCT ACCTGAGCGC GAAGGCCGTC GAGCAGGTCG CGGCGGCCGG CAACTACACG
CTCGGCAACC TGACGATGGG CCTGAACTAC TCGAACGTGA AGTACCTGCC GGGCAACGGC
TCCGCGTTCA CGGATACGGC CGTGTTCAAT ACCTATGGCG CGCTCGCCGC GTACCGCTTC
ACGCCGACCT TCTCGGTGGC CGGCGCGTTC GCGTACACGC TCGCGTCGAA GGCGAACGGC
GTGTCTGGCG CGGCCCGCTA CCAGCAGTAT TCGCTGAAGG AGTCGTACAG CCTGTCGAAA
CGCACGACGC TCTATGCGCT GCAGGCGTAT ACGCATGCGA GCGGACAGAC GCTCGGCGCG
CAAGGCGCCG GCCATATCGT CGACGCGGCG CCGATCGTCG GCGATTCGCA ACAGCTCACG
CCGTCGACGA CGCACGGCCA GTTCGTCGGC ATGGCCGGGA TCGCCGTCAC GTTCTGA
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| Protein sequence | MNASHYPHCR FAILILSAAA FGAGAAHAQS SVTLYGVVDD SIAYVNNQQG HSNVYLRDGN
LYASKFGLRG DEDLGGGTHA IFDLQSGFNL NTGAQAAAGT IFNRQAYVGL RNDHYGTVTA
GRQYTPYFLL VGPYASSNWL TGATGAHPGD IDGLDTTIRV NNSVTYTSPT LSGLTASAMY
AFGGIAGATG KGNTFSAALR YANGPVGIAA GYLRINSSGS SAGFLNPATA ASGSFAVSVL
NQGYLSAKAV EQVAAAGNYT LGNLTMGLNY SNVKYLPGNG SAFTDTAVFN TYGALAAYRF
TPTFSVAGAF AYTLASKANG VSGAARYQQY SLKESYSLSK RTTLYALQAY THASGQTLGA
QGAGHIVDAA PIVGDSQQLT PSTTHGQFVG MAGIAVTF
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