| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4030 |
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| Symbol | |
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| ID | 6181004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1049650 |
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| End bp | 1051275 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683800 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001810711 |
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| Protein GI | 172063060 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.562876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.281547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGCC AAGGCAACAC ACACCCTTCC GTCCCGCTTT CCCGTTCCGT GCCCGCCGAC
GGCGGTCACG GCAAATTCAA GAAACAGCTG TCGCTGACCG ACCTGACGTT CATCGGCCTC
GGCGCGATCT TCGGCTCGGG TTGGCTGTTC GCCGCGAGTC ACGTCTCGGC GATCGCCGGC
CCGGCCGGCA TCTTCTCGTG GCTGCTCGGC GGCTTCTCGG TGCTGCTGCT GGGCATCGTG
TACTGCGAGC TCGGCGCCGC GCTGCCGCGC GCGGGCGGCG TGGTCCGCTA CCCGGTGTTC
TCGCACGGCC CGCTGCTCGG CTACCTGATG GGTTTCATCA CGCTGATCGC GTTCTCGAGC
CTGATCGCGA TCGAAGTGGT CGCCGCGCGC CAGTACGCGG CCGCGTGGTT CCCCGGCCTC
ACCAAGGCCG GCTCGAGCGA CCCGACGACG CTCGGCTGGC TCGTGCAGGC CGGGCTGCTG
TGCTTCTTCT TTTACCTGAA CTATTCGAGC GTGAAGACGT TCGCGAAGGC GAACAACGTC
ATCAGCATCT TCAAGTTCAT CGTGCCGCTG TCGGTGATCG CGGTGCTGTT CACGTTCTTC
AAGCCCGCCA ATCTGACCCT GCACGGCTTC GCGCCGTTCG GCATGCCGGG CATCGAGATG
GCCGTGTCGG CCGGCGGGAT CATTTTCGCG TACCTGGGCC TCACGCCGAT CGTGTCGGTC
GCGAGCGAAG TGCGCAATCC GCAGCGCACG ATTCCGATCG CACTGATCCT GTCGATCCTG
CTGTCGACGC TCATCTACGT GCTGCTGCAG CTCGCGTTCA TCGGCAGCAT CCCGACCGAC
ATGCTCGCCG CCGGCTGGCA CGACGTGAGC AAGGCGTTCT CGCTGCCGTA CCGCGACATC
GCGCTCGCAC TGGGCGTAGG CTGGCTCGCG GTGATGGTCG TGGCCGACGC GATGATCTCG
CCGAGCGGCT GCGGCAACAT CTACATGAAC GCGACGCCGC GCGTCGTCTA CGGCTGGGCG
AAGACGGGCA CGTTCTTCAA GGTGTTCACG CGCGTCGACG AAGCGTCGGG TATCCCGCGC
GCAGGCCTGT GGCTCACGTT CGGCCTCTCG ATCTTCTGGA CGATGCCGTT CCCGTCGTGG
GAAGCGCTGA TCAACATCGT GTCGGCCGCG CTCGTGCTGA GCTACGCGGT CGCGCCCGTG
TCGGTCGCCG CGCTGCGCCG CACCGCGCCC GACCTGTCGC GGCCGTTCCG CGCGGTGGCG
TTCGGCATCA CCGGCCCCGC GTCGTTCGTG ATCGCCGCGC TGATCGTCTA CTGGTCGGGC
TGGGGCACGG TGTCCTGGCT GCTCGGCCTG CAGATCGTGA TGTTCGTGAT CTATCTCGCG
TGCCGCCGCT GGGTGCCGAC CGCGCACCTG AGCATCGCCG AGCAGGTGCG TTCGTCCGCG
TGGCTGATCG CGTTCTACGC GGCCATGATC GTGCTGTCGT ACTTCGGCGG CTTCGGCGGC
ACGGGCCAGC TCGCGCATCC GTACGACACG GTCGTCGTCG CGGCCGTCGC GCTCGTCATC
TACTGCTGGG GCGCCAACAC CGGCATCCGT TCCGACAAGC TTCAGCTCGA GGACGACGAA
GACTGA
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| Protein sequence | MPGQGNTHPS VPLSRSVPAD GGHGKFKKQL SLTDLTFIGL GAIFGSGWLF AASHVSAIAG
PAGIFSWLLG GFSVLLLGIV YCELGAALPR AGGVVRYPVF SHGPLLGYLM GFITLIAFSS
LIAIEVVAAR QYAAAWFPGL TKAGSSDPTT LGWLVQAGLL CFFFYLNYSS VKTFAKANNV
ISIFKFIVPL SVIAVLFTFF KPANLTLHGF APFGMPGIEM AVSAGGIIFA YLGLTPIVSV
ASEVRNPQRT IPIALILSIL LSTLIYVLLQ LAFIGSIPTD MLAAGWHDVS KAFSLPYRDI
ALALGVGWLA VMVVADAMIS PSGCGNIYMN ATPRVVYGWA KTGTFFKVFT RVDEASGIPR
AGLWLTFGLS IFWTMPFPSW EALINIVSAA LVLSYAVAPV SVAALRRTAP DLSRPFRAVA
FGITGPASFV IAALIVYWSG WGTVSWLLGL QIVMFVIYLA CRRWVPTAHL SIAEQVRSSA
WLIAFYAAMI VLSYFGGFGG TGQLAHPYDT VVVAAVALVI YCWGANTGIR SDKLQLEDDE
D
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