| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4021 |
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| Symbol | |
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| ID | 6181436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1038178 |
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| End bp | 1039692 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683791 |
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| Product | succinate CoA transferase |
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| Protein accession | YP_001810702 |
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| Protein GI | 172063051 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0427] Acetyl-CoA hydrolase |
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| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.205204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.45753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAT CACGCATCCT CGCTCCCGCC CTGCGTTCGC TCGTCCGCAC CGCCGACGAA
GCCGCCGCGC TGATCCGTCC CGGCATGACC GTCGCGATGA GCGGCTTCAC CGGCTCGGGT
TATCCGAAGG CCGTGCCGTC CGCGCTCGCC GCCCACATCG AGGCCGCCCA CGCGCGCGGC
GAGGACTTCC GGATCAACGT GCTGACGGGC GCGTCGACCG CGCCGGAGCT CGACGGCGCG
CTCGCCCGCA CCAACGGCAT CTCGATGCGC CTGCCGTACC AGTCCGACCC GACGCTGCGC
GACAAGATCA ACAGCGGCGA AGTCGACTAC CAGGACGTCC ATCTGAGCCA CGTCGCGCAA
TACGCGTGGT TCGGGCTGTA CGGCGACCTC GACGTCGCGA TCGTCGAAGT CGCGGGCATC
CGCGAGGACG GGCTGCTGAT TCCGTCCGCA TCGATCGGCA ACAACAAGAC GTGGCTCGAA
CAGGCGAAGC ACGTGATCCT CGAAGTCAAC TCGCGCCAGC CGCTCGGCCT CGACGGGATG
CACGACGTCT ATTACGGCAC CGCGCTGCCG CCGCACCGCA AGCCAATTCC GCTGACCAAA
AGCGACGACC GGATCGGCGA GCCGTACCTG CGCTGTCCGG CCGACAAGAT CGTCGCGATC
GTCGAGACCG ACGCGCCGGA CCGCAGCAAC GCGTTCTCCG CGCCGGACGC CACGTCCAAG
CAGATCGCGC TGCAACTGAT CGACTTCCTG CGCCACGAAG TGAAGCGCGG CCGTCTGCCG
GAAAACCTGC TGCCGCTGCA GTCGGGGGTC GGCAACATCA CGAACGCGGT GCTCGCGGAA
CTGAGCTCCG CCGGCTTCTC GAACCTGACC GCGTACACCG AGGTGATCCA GGACGGCATG
CTCGACCTGC TCGACGACGG CACGCTGAGT TTCGCGTCGG CCACGGCGCT GTCGCTGAGC
CCGGCCGCCG TGCAGCGCTT CGCCGACGAG ATCGCGACGT TCCGCGAAAA AATCCTGCTG
CGCCCGCAGG AGATCAGCAA CCATCCGGAA CTCGTGCGCC GGCTCGGCTG CATCGCGATG
AACGGGATGA TCGAAGCCGA CATCTACGGC AACGTGAACT CGACGCACGT GATGGGCACG
AAGATCCAGA ACGGCATCGG CGGCTCGGGC GATTTCGCGC GCAACGGCTA CCTGTCGTGC
TTCATGTCGG CCAGCACCGC GAAGGGCGGC GCGATCTCGC GGATCGTGCC GATGGCGAGC
CACGTCGACC ATACCGAGCA CGACGTCGCG GTGGTCGTCA CGGAGCAGGG GCTCGCCGAC
CTGCGCGGCC TGTCGCCGAA GCAGCGTGCG CGCAAGATCA TCGCGACCTG CGCGCATCCG
GACTACCGTC CGATGCTCGA GGACTACTTC GAGCGCGCGT CGCGCGAGAG CTTCGGCAAG
CACACGCCGC ATCTGCTCGC CGAGGCGCTG TCGTGGCACG AACGCTACGT TCGTACCGGG
ACGATGAAGG CCTGA
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| Protein sequence | MSSSRILAPA LRSLVRTADE AAALIRPGMT VAMSGFTGSG YPKAVPSALA AHIEAAHARG
EDFRINVLTG ASTAPELDGA LARTNGISMR LPYQSDPTLR DKINSGEVDY QDVHLSHVAQ
YAWFGLYGDL DVAIVEVAGI REDGLLIPSA SIGNNKTWLE QAKHVILEVN SRQPLGLDGM
HDVYYGTALP PHRKPIPLTK SDDRIGEPYL RCPADKIVAI VETDAPDRSN AFSAPDATSK
QIALQLIDFL RHEVKRGRLP ENLLPLQSGV GNITNAVLAE LSSAGFSNLT AYTEVIQDGM
LDLLDDGTLS FASATALSLS PAAVQRFADE IATFREKILL RPQEISNHPE LVRRLGCIAM
NGMIEADIYG NVNSTHVMGT KIQNGIGGSG DFARNGYLSC FMSASTAKGG AISRIVPMAS
HVDHTEHDVA VVVTEQGLAD LRGLSPKQRA RKIIATCAHP DYRPMLEDYF ERASRESFGK
HTPHLLAEAL SWHERYVRTG TMKA
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