Gene BamMC406_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4020 
Symbol 
ID6181435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand- 
Start bp1036858 
End bp1037538 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID641683790 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001810701 
Protein GI172063050 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.329923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.387897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAA GAAAAACCGC CAAACACCCG GAACCGCCGC TGCCACGCAC TTGGGATGCG 
CGGCTCGCGC GCGCGCTCGT CCGGCCGCTG ATCGACACGC CGGTCACCCC GAATCACCTC 
ACTACCCTTC GTCTGCTGAT CGGCCTCGCC GGCGCCTGGT GCCTTGCGCA AGGCGGCTTC 
GGCTGGAGCA ACGCAGGCGC ATTTCTGATC GTGCTGTCGA ACTTCGTCGA CCATACCGAC 
GGCGAACTCG CGCGCATCAG CGGCAAGTCC AGCAAGATCG GTCACTTTTA CGACCTCGCG 
GCCGACGCGC TCGTGACGGT CGCGCTGTTC GTCAGCATGG GCGTCGGCAT CGTCGCCCAG 
GGCGGCCAGA TGGCCGCGTC GCCGGTGCTG CTCGGTGCGC TGGCCGGCGG TGCCGTCGCG 
CTGATCTTCT TCCTGCGCAT GCGGATCGAG TCGGTCGCCG GCAAGGCCGG CACCAAGCAG 
GCGTTCGCCG GCGGCTTCGA GACGGAAGAC GTGCTCTACC TGCTGCCGCT CGTGACGCTC 
ACCGACAGCG TCCAGCCGTT CCTGCTCGCG GCGTCGATCG GCGCCCCGCT GTTCGCCGCG 
TGGGTCGTGC TCGACTGGTG GCGCATCGTG CGCCGCGGCA ACACCCCGCA GAATTCAACC 
GAAATCCAGG CTTCCAAATG A
 
Protein sequence
MDQRKTAKHP EPPLPRTWDA RLARALVRPL IDTPVTPNHL TTLRLLIGLA GAWCLAQGGF 
GWSNAGAFLI VLSNFVDHTD GELARISGKS SKIGHFYDLA ADALVTVALF VSMGVGIVAQ 
GGQMAASPVL LGALAGGAVA LIFFLRMRIE SVAGKAGTKQ AFAGGFETED VLYLLPLVTL 
TDSVQPFLLA ASIGAPLFAA WVVLDWWRIV RRGNTPQNST EIQASK