| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4000 |
|---|
| Symbol | |
|---|
| ID | 6179405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1007341 |
|---|
| End bp | 1007781 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641683770 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001810681 |
|---|
| Protein GI | 172063030 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.238971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.295716 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCT CGTCGTTTAA ACAGCATGCT CGCCCGCTGC TCGGGATCGT CGTCGTATTC
GCGCTCTGCA TCGATGCCGT GGCCCAGGGC CAGACCCAAA CCCAAACCGA GATGCCCGCG
TCCGGCGCGG GCCCGGAGCG ATACGTGATT TCGTACATCT GCGGTGATGC ACGAATCGAC
GGTACGGCGC CCCTGCCCCC CGACGGCCGT CCGTACAACC TCGGTGTGTC GTTCGTGGCG
GGCAGCACCG GCCAGCCGCT GTCCAACGTG CAGGTCCGGC TACGGCGACA CGGCCGCGTG
CTGCTGGAAT TCAAGGCCAC GGGGCCGCGC TGTCTATTCA GTGTGCCCGA GGCCAGTTAC
CGGGTCGAAG GCACCTATCA GGGGGCGACG CAGTTCGCGA TCGTCGAAAC GGGTGCGCTC
ACCACGCAGT TGAAATGGTG A
|
|---|
| Protein sequence | MSSSSFKQHA RPLLGIVVVF ALCIDAVAQG QTQTQTEMPA SGAGPERYVI SYICGDARID
GTAPLPPDGR PYNLGVSFVA GSTGQPLSNV QVRLRRHGRV LLEFKATGPR CLFSVPEASY
RVEGTYQGAT QFAIVETGAL TTQLKW
|
|---|
| |