Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3996 |
Symbol | |
ID | 6180791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 999962 |
End bp | 1001233 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641683766 |
Product | N-glycosyltransferase |
Protein accession | YP_001810677 |
Protein GI | 172063026 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.706651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0922124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCCC ACAGCATCAT CCAGCGCCTG CAGGACTTCG TCTTCTACTA TCCGTTCTTC ATGTCGTATC TGTGGATGAT CGGCGGCGTC GTTCACTACT TCCTGCTCGA GGAGGGCCGC GAGCTGTCGA TGCGCACGAT TGCGTCGAGC GGCATCCCGA AGATCTCGAT CGTCGTGCCG TGCTTCAACG AAGCGGCGAA CGCGCGCAGC GTGATCCGCC ACCTGAACGC GATGGACTAC CCGAACTACG ACATCATCGC GGTCAACGAC GGCAGCAAGG ACCGCACCGG CGAGATCCTC AACGAGCTGG CCGTCGAGAT CCCGCGGCTG CTCGTGATCC ATCACGCGCG CAACGAGGGC AAGGCGGTCG GGCTCACGAC CGCGGCCGCG GTATCGAACG CCGAATACCT GCTCTGCATC GACGGCGACG CGCTGCTCGC GCACGACGCG ATCGGCTGGA TGCTCGAGCA TTTCCTGACC GATCCGGGTG TCGGCGCGGT CACCGGCAAC CCGCGCATCC GCACGCGCAC GTCGCTGCTC GGGCGCATGC AGGTCGGCGA ATTCTCGTCG ATCGTCGGGC TGATCAAGCG CACGCAGCAG GTGTACGGCC GCATCTTCAC GGTGTCGGGC GTGATCACGA TGTTCCGCAA GACCGCGCTC GCCGACGTCG GCTACTGGAG CTCGGACATG CTGACCGAGG ACATCGACAT CAGTTGGAAG CTGCAGTGCC GCGACTGGCG CGTCGTGTAC GAGCCGCATG CGCTCAGCTG GATCCTGATG CCCGAGACGG TCCGGGGGCT CTATCGTCAG CGGCTGCGCT GGGCGAAGGG CGGCATCCAG GTGCTGATGA AGTACGCGGG CACGCTCGCG CGGCCGACGC AGATGATGAT GTGGCCGCTG TTCATCGAGT ACCTGATCGG CATTGCGTGG GCGTACTCGA TGTCGTTCAT CCTGCTGCTC GCGCTGATCG ACGTGGTCTA CCCGCTTCCG CCGAGCTGGC ATGTGTCCGT GGTGCCGCAC TGGCACGGGA TGCTGCTGGT GGCGACCTGC ATCCTGCAGC TGATCATCGG CAGCATGATC GATCGTCGTT ACGACGAGAA ACTCCTGATG TATTTCCTTG ACACCATCTG GTACCCCGTC GCGTTCTGGC TGATCAGCAT GATCACCACC GTCGTCGCCC TGCCCGCCGT CGTATTGCGG GGCCGCGGCA AGCGCGCCGT TTGGGTCAGT CCCGACCGAG GCATTCAACA TGAAGAACGC GCCGATTATT GA
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Protein sequence | MNSHSIIQRL QDFVFYYPFF MSYLWMIGGV VHYFLLEEGR ELSMRTIASS GIPKISIVVP CFNEAANARS VIRHLNAMDY PNYDIIAVND GSKDRTGEIL NELAVEIPRL LVIHHARNEG KAVGLTTAAA VSNAEYLLCI DGDALLAHDA IGWMLEHFLT DPGVGAVTGN PRIRTRTSLL GRMQVGEFSS IVGLIKRTQQ VYGRIFTVSG VITMFRKTAL ADVGYWSSDM LTEDIDISWK LQCRDWRVVY EPHALSWILM PETVRGLYRQ RLRWAKGGIQ VLMKYAGTLA RPTQMMMWPL FIEYLIGIAW AYSMSFILLL ALIDVVYPLP PSWHVSVVPH WHGMLLVATC ILQLIIGSMI DRRYDEKLLM YFLDTIWYPV AFWLISMITT VVALPAVVLR GRGKRAVWVS PDRGIQHEER ADY
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