Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3994 |
Symbol | |
ID | 6181105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 997550 |
End bp | 999373 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683764 |
Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
Protein accession | YP_001810675 |
Protein GI | 172063024 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.13069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.149287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCGGAA TCGTCGGAGC AAGCGGCCTG AAGAATCAGG TGCCGCAACT GGTCAATGCG TTGAGCCGGC TCGAGTATCG CGGCTACGAT TCGTGCGGCA TCGCCGTGCT GCGCGACGGC CACCTGCGCA GCGAACGCAC GCTGCGGCGC GTGGCGGACC TGCAGCACCG CGTGCTGACG CTCGGGCTCG AAGCGCAGAC CTGCATCGCG CACACGCGCT GGGCAACACA CGGCGCGCCG TCGGAGGTCA ACGCGCACCC GATCATGTCG GGCGACACGA TCGCGGTCGT GCACAACGGG ATCATCGAAA ACCATGACGC GCTGCGCGCC GAACTGCGGC AGCGCGGCTA TACGTTTCGC GGCGAAACCG ACACCGAGGT GATCGCGCAC CTGATCCACA GCGTCTATCG CGACAACCTG TTCGATGCCG TGATCCGCGC TGTGAAGCGG CTGCACGGCG CGTATGCGAT CGCCGTGCTG AGCGCGCTCG AACCGCAGCG GCTCGTCGCC GCGCGCGCCG GCTCGCCGCT CGTGATCGGC ATCGGCGCGG ACCAGAACTA TCTGGCGTCC GACTGCGCGG CCCTCGGCGA CCTGACCGAC CGCTTCGTCT ACCTCGAAGA CGGCGACGTC GCGCTGATCA CGCCGGAGCG CATCGACGTC GTCGATTCGG TCGGGTGCGA AGCCAGCCGT CCGCTGTGCG AGGTCAAGGC GCGCGACGAC GACGCCGCGC TTGGGCCCTA TCAGCACTTC ATGCAGAAGG AGATCTTCGA GCAGCCGAAG GCGATCGCCA GCACGATCGA CGGCATCGAC ACGATCTCGC CCGCGCTGTT CGGCGACGAA GCAAGCGCGC GCGCGTTGTT GTCGAAGACC CGCGGCGTGC TGCTGCTCGG CTGCGGCACC AGCTACTACG CGGGCCTGAC GGCGAAATAC TGGATCGAGA GCATCGCGGG CATCCCGGCC CAGGTCGAGA TCGCGAGCGA ATACCGCTAT CGCGATACGG TGCCCGATCC GCGCACGCTG GTCGTCGGCA TCTCGCAGTC GGGCGAGACC GCCGACACGA TCGGCGCGCT CGAGCGCGCG CGAGAGATGG GCCAGGAGAT GTCGATGGCG ATCTGCAACG TGGCGACCAG CTCGATCGCG CGCAGCGCGC CGCTCTGCTT CCTGACGCGT GCCGGCATCG AGCTCGGCGT CGCGTCGACC AAGGCGTTCA CGACGCAGCT CGTCGCGCTG TTCCTGTTGA CGCTGACACT CGCGCAGCAG CGCGGCCGGC TCGACGCCGC GCAGGTCGCG ATGCACCTGA AGAAGCTGCA CGAACTGCCG GAGCGCATCG CCCACGCCCT CGCGCTGGAA ACGCAGATCA TGGGCTGGGC CGCGAAGTTC GCGCGCACCG AGAACGCGCT GTTCCTCGGG CGTGGCATTC ACTATCCGAT CGCGCTGGAA GGCGCGCTGA AGCTCAAGGA AGTGTCGTAC ATCCATGCGG AAGGCTATCC GGCCGGCGAG CTGAAGCATG GCCCGCTCGC GCTCGTCACG AGCGCGATGC CGGTCGTCAC GATCGCACCC GACGACCGCC TGTTCCAGAA GCTGAAGTCC AACATGGCCG AAGTGCGCGC CCGCGGCGGG CGGCTGTACG TGCTCGCGGG TCATCAGCTC GAGATCGATG CCGACCGCGA CACGCACCTG ATCCGCGTGC GCGAATCGGG CGATGCGCTG TCGCCGATCG TCAACGTGAT TCCGTTGCAG CTGCTCGCGT ATCACGTCGG CTGCGCGCGC GGCGCCGACG TCGACAAGCC GCGCAACCTC GCGAAGTCGG TCACTGTCGA ATGA
|
Protein sequence | MCGIVGASGL KNQVPQLVNA LSRLEYRGYD SCGIAVLRDG HLRSERTLRR VADLQHRVLT LGLEAQTCIA HTRWATHGAP SEVNAHPIMS GDTIAVVHNG IIENHDALRA ELRQRGYTFR GETDTEVIAH LIHSVYRDNL FDAVIRAVKR LHGAYAIAVL SALEPQRLVA ARAGSPLVIG IGADQNYLAS DCAALGDLTD RFVYLEDGDV ALITPERIDV VDSVGCEASR PLCEVKARDD DAALGPYQHF MQKEIFEQPK AIASTIDGID TISPALFGDE ASARALLSKT RGVLLLGCGT SYYAGLTAKY WIESIAGIPA QVEIASEYRY RDTVPDPRTL VVGISQSGET ADTIGALERA REMGQEMSMA ICNVATSSIA RSAPLCFLTR AGIELGVAST KAFTTQLVAL FLLTLTLAQQ RGRLDAAQVA MHLKKLHELP ERIAHALALE TQIMGWAAKF ARTENALFLG RGIHYPIALE GALKLKEVSY IHAEGYPAGE LKHGPLALVT SAMPVVTIAP DDRLFQKLKS NMAEVRARGG RLYVLAGHQL EIDADRDTHL IRVRESGDAL SPIVNVIPLQ LLAYHVGCAR GADVDKPRNL AKSVTVE
|
| |