Gene BamMC406_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3978 
Symbol 
ID6179887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp980162 
End bp981211 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content70% 
IMG OID641683748 
Productpeptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 
Protein accessionYP_001810659 
Protein GI172063008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.230026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.195489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTT CCCTTTCCCC CGTCATCGCC GGCACGCCGT TCGACATCGG CGTGCGCCTC 
GGCGAGCTCG CCCGCCCCGT GTTCGACGAA TACATGCAGC AGAGCAGCGC ATGGCAGGCC
GTGCGGCGCT GGCGCGGCCA CCCGTTCGTC GCCGCGCTGC GGCAGGCGGC GCTGGCCGCG
TATCCCGATC TCGTCGCGGA ACTGGACGGG ATCGCGGCGG GTGTCGGCTG GCCGGCCGAC
GACATCTTCC TGTGGAATTG CCGCGGCGAA CTGATCCACA ACGCGCCCGA CGGCTGCACG
ACACTCGCCG CGCGCGATGC TGATGGCACG CGCTGGATCG CGCACAACGA GGACGGCGAT
CCGTACCTGC GCGGGCGTTG CCTGCTGGTC GACGTGCAGC CGCAGGGCAA GCCGGGCTTC
ATCAGCTTCT ATTACCCGGG CTCGCTGCCC GGGCATACGT TCGCCGCGAA CCGCGCGGGC
GTCGCGCAGG CGATCAACAA CCTGCGGATC CTGACGCCGG CGGCCGGCGT GCCGCGGATG
ATCCTCGCGC GCGCGGTGCT CGACGTGACG TCGCTCGATG CGGCCGCCGA CGTGCTGCGC
ACGCATGCGC GCGCGAGCGG CTTTCACCAC ACGCTCGGCG CGACCGGCGA TGCGCGGCTC
CTGAGCATCG AGGCGAGCGT CGCGCGGTGC TCGGTGGTCG ACGTCGCACG GCTTGCTGGC
CATGCCAACC ATCTCGTACA TCCCGGCTGC GAAGCTGAAG CGCAGATCGT CACGCAATCG
TCCGGCGATC GCCAGCGCCG CGTCGATGCG CTGACACAGG GCATCGACAC GATCGACGAA
GCCGCGCTGC GGCACGTGCT CGGCGATCGC GCACCGGAAG GGCTGCCGAT CTATCGCGAC
GATCCGGCCG ATCCCGACGA CGAGAACACG CTGGCGACCG CGGTGTTCGC CGTTCGCGAC
GCTGCGATCG ACTTCACCAT CCATCAACAC GGCACGCAGC GCTTCGCGAC GCGCATCGTG
CCGTCCGCGC ACGCGCGCAG CGCGTCCTGA
 
Protein sequence
MPLSLSPVIA GTPFDIGVRL GELARPVFDE YMQQSSAWQA VRRWRGHPFV AALRQAALAA 
YPDLVAELDG IAAGVGWPAD DIFLWNCRGE LIHNAPDGCT TLAARDADGT RWIAHNEDGD
PYLRGRCLLV DVQPQGKPGF ISFYYPGSLP GHTFAANRAG VAQAINNLRI LTPAAGVPRM
ILARAVLDVT SLDAAADVLR THARASGFHH TLGATGDARL LSIEASVARC SVVDVARLAG
HANHLVHPGC EAEAQIVTQS SGDRQRRVDA LTQGIDTIDE AALRHVLGDR APEGLPIYRD
DPADPDDENT LATAVFAVRD AAIDFTIHQH GTQRFATRIV PSAHARSAS