| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3976 |
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| Symbol | |
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| ID | 6179485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 978090 |
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| End bp | 979211 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683746 |
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| Product | alanine racemase |
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| Protein accession | YP_001810657 |
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| Protein GI | 172063006 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.087726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.384892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTC CCATCGTCGC CCATGTCCGT CCGGACGCCG TCCGTCACAA CCTCGACTTC
ATCCGCCGCA CCGCCGCGCA ATCGCGCGTG TGGGCCGTGA TCAAGGCCAA CGCATACGGT
CACGGGATCG AGCGGATCTA CCCGGGCCTC GCGGCCGCCG ACGGCATCGC GCTGCTCGAT
CTCGACGAAG CCGTGCGCGT GCGCGAGCTC GGCTGGGACA AGCCCGTGCT GCTGCTCGAA
GGGATCTTCG AGCCGGCGGA CGTCGAACTG GCCGATCGCC ACCGGCTGAC GGTGGCCGTG
CACTGCGACG AACAGCTCGA CGTGCTGATC GCCGCGAAGC CGCGGCAGCC GCTCGACATC
CAGCTGAAGA TGAACTCCGG AATGAACCGG CTCGGCTACC GGCCGCACGC GTTCCGCGCC
GCGTGGGAAC GTGCGGCGGC CGCGCCGTCG ATCGGCAAGA TCACGCTGAT GATGCATTTC
GCGAACGCCG ACGAAGGCGA AGTCGACTGG CAGCTCGAGC AGTTCGACGC GGCCACGGCC
GGGATTCCGG GCGAGCGCTC GGCATCGAAT TCGGCGGCCG TGCTGTGGCA TCCGCGCGCG
CACCGCGACT GGGTGCGGCC CGGCACGATC CTGTACGGCG CGTCGCCGAC CGGCGCGGCG
CGGCACATCG CCGACACGCC GCTGATGCCC GCGATGACAC TGACCAGCAA GATCATCGGC
GTGCAGACGC TCGCGCCGGA CGAGACGGTC GGTTACGGCC GCCGCTTCAC CGCGGACCGG
CCGATGCGGA TCGGCGTCGT CGCGTGCGGC TACGCGGACG GCTATCCGCG CCATGCACCG
ACCGGCACGC CGATCGCGGT GGACGGCGTG ATGACGCGCG TCGTCGGGCG CGTGTCGATG
GACATGCTGA CCGTCGACCT GACGCCTTGC CCGAACGCGG GCATCGGGTC GGGCGTCGAG
CTGTGGGGCG ATCAGGTGAA GGTGGACGAT GTCGCCGAAG CCAGCGGCAC GATCGGCTAC
GAGCTGATGT GCGCGCTCGC GCACCGCGTG CCGGTCGTGA TCGTGCCGCC GGGCGCGTCG
ACGGTGCAGC CGCTGCTGCG CACGGGCAGC CACGGGCGTT GA
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| Protein sequence | MPRPIVAHVR PDAVRHNLDF IRRTAAQSRV WAVIKANAYG HGIERIYPGL AAADGIALLD
LDEAVRVREL GWDKPVLLLE GIFEPADVEL ADRHRLTVAV HCDEQLDVLI AAKPRQPLDI
QLKMNSGMNR LGYRPHAFRA AWERAAAAPS IGKITLMMHF ANADEGEVDW QLEQFDAATA
GIPGERSASN SAAVLWHPRA HRDWVRPGTI LYGASPTGAA RHIADTPLMP AMTLTSKIIG
VQTLAPDETV GYGRRFTADR PMRIGVVACG YADGYPRHAP TGTPIAVDGV MTRVVGRVSM
DMLTVDLTPC PNAGIGSGVE LWGDQVKVDD VAEASGTIGY ELMCALAHRV PVVIVPPGAS
TVQPLLRTGS HGR
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