| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3974 |
|---|
| Symbol | |
|---|
| ID | 6179483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 977170 |
|---|
| End bp | 977964 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641683744 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001810655 |
|---|
| Protein GI | 172063004 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.563062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.377725 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCGA ATCCCGCTTC AGAGGAACCC ATCCTGCTGC GCGACGCGCA CGACGGCGTC
GTCACGGTGC GGCTGAACCG GCCGCAGCAG TTCAACGCGT TGTCGGAGGC GATGCTCTCG
AGCCTGCACG ATGCGTTCGA ATCGCTGGCC GCCGATCCGC ACGTGCGCTG CGTCGTGCTC
GCCGCGCAGG GCAAGGCGTT CTGCGCGGGC CACGACCTGC GGCAGATGCG CGGCAAGCCC
GAACTCGATT ACTACCGCAC GCTGTTCGCG CAATGCAGCC GCGTGATGCT CGGGATGCGC
GCACTGCCGG TGCCGGTGAT CGCGCGCGTG CAGGGGATCG CCACGGCGGC CGGCTGCCAG
CTCGTCGCCG CGTGCGACCT TGCGATTGCG GCCGACACCG CGCGCTTCGC GGTGTCGGGC
ATCAACGTCG GGCTGTTCTG TTCGACGCCG GCCGTCGCGT TGAGCCGCAA CGTCACCACG
AAGCGCGCGT TCGACATGCT CGTGACCGGG CGTTTCGTCG ATGCGGCGAC GGCCGCCGCG
TGGGGGCTCG TCAACGAGTC GGTGCCCGAG GATGCGCTCG ATGCGGCCGT CGCGCGCAAG
GTCGCGGAGA TCGTCGCGAA GAGCCCGGCC GCGGTGCGCT ACGGCAAGCA GATGTTCTAT
CGGCAGCGCG AGTTGCCGCT CGATGAAGCC TACGCGTATG CGGGCGACGT GATGGCGCGC
AACATGATGG AAGAGGACGC CGGCGAAGGG ATCGATGCGT TCCTGGAGAA GCGCAAGCCG
ACGTGGCGGT CGTAG
|
|---|
| Protein sequence | MDSNPASEEP ILLRDAHDGV VTVRLNRPQQ FNALSEAMLS SLHDAFESLA ADPHVRCVVL
AAQGKAFCAG HDLRQMRGKP ELDYYRTLFA QCSRVMLGMR ALPVPVIARV QGIATAAGCQ
LVAACDLAIA ADTARFAVSG INVGLFCSTP AVALSRNVTT KRAFDMLVTG RFVDAATAAA
WGLVNESVPE DALDAAVARK VAEIVAKSPA AVRYGKQMFY RQRELPLDEA YAYAGDVMAR
NMMEEDAGEG IDAFLEKRKP TWRS
|
|---|
| |