Gene BamMC406_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3972 
Symbol 
ID6180744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp975712 
End bp976671 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content67% 
IMG OID641683742 
Producthypothetical protein 
Protein accessionYP_001810653 
Protein GI172063002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.20307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAG ACCAACCCGT CAGCAAGGTG CTCGTGCTCG ACGACAGCCC CGCGCATGCG 
GCGACGATCA AGCGCTTCTG CGACGAGCAC AACCTCGTCG GCCTGACCGT GCGGCGCAAC
CGCCTGCTGA AGGTGCTGCG CTCGAACATC GATCTCGGCG CGATCCTGCT CGCCGAGGAC
TACGGCGGCT CGCCGGCCGA GAGCGCGATC GTCGCGACGC AGATCGACGC GTTGCGGCCG
GAGCTGCCGA TCATCCTGCG CCGTGCGTCG GACGCGTCGC GCGACGGGCT GCCCGACGCG
CTCGCGCGCG TCGCGTGCGC GGCCTACGTC GCCGACGACA TGACGCCGCT CGCGCGCGCG
ATCGGCGAAT ACCTGTTCGG CCGGGACTAT CCGAACGCGC TCGTGCGCGG CATCTCGGAG
ATCACCGAGG CGCGGCTCGA CAGTCTGTTC CCGGGCATGA CGATCGAGCG CGACACGCCG
TGCATCGTGC GCGACCAGAT CATCTTCGGC GAAGTGTTCA GCCTGATCGC GCTCGAAAGC
GCGTGGTGCC GCGGCTACAT GCTGCTGCAG ACGAGCGAGC AGCCGCTGCT CGACATGATC
GGCGGCACGC GCGACGACGG CCGCGCGCCC GACTTCCGCG ACGTGAACAG CCTGCTCGGC
GAGCTGACCA ACCTCGTGTG GGGCGCGTTC AAGAACCGTT ATCTCGGCGA CGCGGAGGCG
CTCGCGCGCC ATCCGGTGCA GGTGCCGCTC GTCGTCAATC ACAAGCAGAA GTTCATTTCA
TTCGGCGGCG ACTGTCCGCA GCTCTGTTTC AAGTACCGGA TGACCGACAC CGCGTCGGGG
CGATCAGTGC AGCTCGATCA GCGTTTCGTG TTCAGCCTGA GCTGGTCGCC GGAGGATTTC
CGCGAATCGG TGCAGGACGT GGGGCCGATG GTCGAATCGG GCGAACTCGA ACTGTTTTGA
 
Protein sequence
MTVDQPVSKV LVLDDSPAHA ATIKRFCDEH NLVGLTVRRN RLLKVLRSNI DLGAILLAED 
YGGSPAESAI VATQIDALRP ELPIILRRAS DASRDGLPDA LARVACAAYV ADDMTPLARA
IGEYLFGRDY PNALVRGISE ITEARLDSLF PGMTIERDTP CIVRDQIIFG EVFSLIALES
AWCRGYMLLQ TSEQPLLDMI GGTRDDGRAP DFRDVNSLLG ELTNLVWGAF KNRYLGDAEA
LARHPVQVPL VVNHKQKFIS FGGDCPQLCF KYRMTDTASG RSVQLDQRFV FSLSWSPEDF
RESVQDVGPM VESGELELF