Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3966 |
Symbol | |
ID | 6181480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 969880 |
End bp | 970569 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641683736 |
Product | phospholipase/carboxylesterase |
Protein accession | YP_001810647 |
Protein GI | 172062996 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.346189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.196094 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG TCCTGCCGCT GACCACCGAC GCCGAATCCG GCCTCCAGTA CCGGCTGCGC CCGGCCGCCG GCCGCCCCGC GGGCCGCCTG TTGCTGCTGC ACGGCGTCGG CGGCAATGAA ACCAACCTGC TGAACCTGGC CGACACGATC GATCCGCGTA TCGAAATCGC CTTCGTGCGC GGGCCGCTGA CATTCGGCCC CAACCAGCAT GCGTGGTTTC CGGTGCGCTT CGGCCCGAAC GGCCCGGAAA TCGACGCGGC CCGCGCGGAG GCGAGCCGTG CGCAACTGAT CGCGCTGCTG CGTGCGTTGC GCGCGCCGGA CGCCGACACC GGGGCTTCCG ACTTGCCCGC CGTAATCGCG GGTTTCAGCC AGGGCGGCAT CATGAGCGCG AGCGTCGCGC TCACGTCGCC GGCCGACGTC ACCGCATTCG CGGTGCTGTG CGGGCGCATC CTGCCCGAGA TCGATCCGCT GATCGCGTCG CGCGATGCAT TGAGCCGGCT GCACGCGCTG GTGATGCACG GCCGCTTCGA CGACAAGCTG CCGCTCGCGT GGGCCGATAC GGCCGACGCG AAGCTGACGG CCCTCGGCGT CGCGCACGAC ACGCGGCTCT ACGACACCGG CCACGAACTC ACGGCGCCGA TGGCCGGCGA CTTCAGCCGC TGGGTCGGCG CGCGTGTCGG ATTGAACTGA
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Protein sequence | MTDVLPLTTD AESGLQYRLR PAAGRPAGRL LLLHGVGGNE TNLLNLADTI DPRIEIAFVR GPLTFGPNQH AWFPVRFGPN GPEIDAARAE ASRAQLIALL RALRAPDADT GASDLPAVIA GFSQGGIMSA SVALTSPADV TAFAVLCGRI LPEIDPLIAS RDALSRLHAL VMHGRFDDKL PLAWADTADA KLTALGVAHD TRLYDTGHEL TAPMAGDFSR WVGARVGLN
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