Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3965 |
Symbol | |
ID | 6181479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 968343 |
End bp | 969836 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683735 |
Product | amino acid permease-associated region |
Protein accession | YP_001810646 |
Protein GI | 172062995 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.17097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACG TCAGCGAGCG CCCGGCCGAC ACGGCCGGCG GCGCGGATTC CCGTCATGCC GAGCGCGATG CGATGTTCGC GTCGCACGAA GCCGGCTATT CGAAACAGTT GAAGCCGCGC CACGTGCAGA TGATCGCGAT GGGCGGTGCG ATCGGCACCG GCCTCTTTCT CGGCGCGGGC GGCCGCCTGC AGAGCGCGGG GCCCGCGCTG GCGGTCGTGT ATCTCGTGTG CGGCGTATTC GCATTCCTGA TCATGCGCGC GCTCGGCGAG CTGGTGATGC ACCGGCCGAC CAGCGGCGCG TTCGTGTCGT ACGCACGGGA GTTCATGGGC GAGCGCGCGT CGTTCGTCGC GGGCTGGATG TACTACCTGA ACTGGGCGAC CACCGGCATC GTCGACATCA CCGCGGTCGC GATCTACATG AAGTACTGGG CCGCGTTCTC GGACGTGCCG CAGTGGGTGT TCGCGCTCGG CGCGCTCGGC ATCGTGTCGG TGATGAACAT GATCGGCGTG AAGGTGTTCG GCGAGATGGA GTTCTGGTTC TCGATCGTGA AGGTGGGCAC GCTCGCGCTG TTCCTCGGGG TCGGCGCCGT GTTCCTCGCG AGCGGCCATC CGGTCGCCGG CCAGATGCCG GGGCTGCACC TGATCGCGGA TCACGGCGGG ATCTTTCCGC ACGGCATCCT GCCGGCGGTG CTGATCGTGC AGGGCGTCGT GTTCGCGTAT GCGAGCATCG AGCTCGTCGG CGTCGCGGCG GGCGAGACCG CGGATGCGCG CAAGGTGCTG CCGAAGGCAA TCAACAGCGT GATGTGGCGC ATCGCATTGT TCTACGTGGG CTCGGTCGTG CTGCTGACGA TGCTGCTGCC GTGGACCGCG TACAGCGCGC ACGAAAGCCC GTTCGTGACG TTCTTCGGCA AGCTCGGCGT GCCGTACGTC GGCACGGTGA TGAACGTCGT GGTGCTGACC GCCGCGCTGT CGAGCCTGAA TTCCGGCCTC TATTCGACCG GGCGCGTGCT GCGTTCGCTC GCGATGGGCG GCTCGGCGCC GCGCTTCGTG TCGCGGATGA ACGCGCGCGG CGTGCCGTAC GGCGGGATCC TCGTCACGGT CGCGGTCAAC GCGATCGGCG TGCCGCTGAA CTACATCGTG CCGGCGCAGG CGTTCGAGAT CGTGCTGAAC ATGGCGTCGC TCGGGATCAT CACGACCTGG GGCTTCATCG TGATGTGCCA GATCCTGTTC CGCCGCGCGG TCAATCGCGG CGAGCTGAGC CCCGTGTCGT TCCGGATGCC CGGCGCACCG TTCACGTCCT GGCTCACGCT CGGGTTTCTC GCCAGCGTGC TCGTGTTGAT GGCGTTCGAT TACCCGGGCG GCACGTGGAC CGTCGGGATG ATTCCGGTGG TCGTGCTCGC GCTCGTGATC GGCTGGAAGC TCGCGAAGCG GGGTGCCGCG CGCGAGCGGG CAAGCGCCGC ACCGGCCATC GCCGATCCGG CGAGCAACGT CTGA
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Protein sequence | MKHVSERPAD TAGGADSRHA ERDAMFASHE AGYSKQLKPR HVQMIAMGGA IGTGLFLGAG GRLQSAGPAL AVVYLVCGVF AFLIMRALGE LVMHRPTSGA FVSYAREFMG ERASFVAGWM YYLNWATTGI VDITAVAIYM KYWAAFSDVP QWVFALGALG IVSVMNMIGV KVFGEMEFWF SIVKVGTLAL FLGVGAVFLA SGHPVAGQMP GLHLIADHGG IFPHGILPAV LIVQGVVFAY ASIELVGVAA GETADARKVL PKAINSVMWR IALFYVGSVV LLTMLLPWTA YSAHESPFVT FFGKLGVPYV GTVMNVVVLT AALSSLNSGL YSTGRVLRSL AMGGSAPRFV SRMNARGVPY GGILVTVAVN AIGVPLNYIV PAQAFEIVLN MASLGIITTW GFIVMCQILF RRAVNRGELS PVSFRMPGAP FTSWLTLGFL ASVLVLMAFD YPGGTWTVGM IPVVVLALVI GWKLAKRGAA RERASAAPAI ADPASNV
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