Gene BamMC406_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3962 
Symbol 
ID6181133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp964555 
End bp965619 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content71% 
IMG OID641683732 
ProductL-asparaginase II 
Protein accessionYP_001810643 
Protein GI172062992 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4448] L-asparaginase II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.596306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC AACGCGCAGC GGTCGTCACG TACCGCGGCA ATGCGATCGA GAACACGCAC 
GTCGCCGATG TGGCGGTGGT GGATGCCGGC GGCAAGCTGC TGTTCAGGCT CGGCGATCCG
TTCCGGATGA CGCTCGCGCG CTCGGCGGCG AAGCCGGCGC AGGCGCTGTC CGTGATCGAG
ACGGGCGCGC CGGAGCGGTT CGGTTTCGAC GACGCGGACA TCGCGCTGAT GTGCGCGTCG
CACAGCAGCG AGGAGCGGCA CATCGCGCGC ACGCGGGCGA TGCTGGCGAA GGTCGACGCG
CACGAGTCGG ATCTGCGCTG CGGCGGCCAT GCGCCGCTGT CGGACGCGGT GTACCGGTCG
TGGATCAAGC GCGACTACAC GCCGACTGGC GTGTGCAGCA ACTGCTCGGG CAAGCACGTC
GGGATGCTGG CCGGCGCGCG GACGATCGGC GCCGCGATCG CCGACTACCA TCTGCCGGAG
CATCCGATGC AGGTGCGCGT GAAGCAGGTG GTCGCCAACG CATGCGGCCT GCGCGACGAC
GAGGTCGACT GGGCGATCGA CGGCTGCAAC CTGCCGACGC CAGCGTTCCC GCTCGACCGC
CTCGCGCGTC TTTACGCGTC GGTGGCCGAC GGCGCGGATA CGCTGGAAGC CCGCGGCGCG
GCGGCGACCG ATCGCGTGCG TGCGCTGGCG CGCATTCATC ACGCGATGAC GGCCCATCCG
GAGCTGGTCG CCGGCGAAGG GCGCTACTGC ACGGTGCTGA TGGACGCGTT CGAAGGGCAG
GTCGTCGGCA AGCTCGGCGC GGATGCGTGC TACGGGATCG GCGTACGCGC GTCGGCGCGC
ACGCGGGAGC TCGGCGCCGA CGGCGCGCTC GGCATCTCGG TGAAGATCGA GGACGGCAAC
ATCGACGTGC TGTACATGAT GGTCAGCGAA CTGCTCGAAC GGCTGCGGAT CGGCACGGAC
GCGCAGCGCG CGCGGCTCGC CGCGTTCCAC CGGCCGCGGA TGCTGAACAC GCAGGGCGTC
GAGGTCGGGC ACGCGACGTT CCCGTTCGAA TTGCAGGCTG CCTGA
 
Protein sequence
MDTQRAAVVT YRGNAIENTH VADVAVVDAG GKLLFRLGDP FRMTLARSAA KPAQALSVIE 
TGAPERFGFD DADIALMCAS HSSEERHIAR TRAMLAKVDA HESDLRCGGH APLSDAVYRS
WIKRDYTPTG VCSNCSGKHV GMLAGARTIG AAIADYHLPE HPMQVRVKQV VANACGLRDD
EVDWAIDGCN LPTPAFPLDR LARLYASVAD GADTLEARGA AATDRVRALA RIHHAMTAHP
ELVAGEGRYC TVLMDAFEGQ VVGKLGADAC YGIGVRASAR TRELGADGAL GISVKIEDGN
IDVLYMMVSE LLERLRIGTD AQRARLAAFH RPRMLNTQGV EVGHATFPFE LQAA