| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3957 |
|---|
| Symbol | |
|---|
| ID | 6180950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 959817 |
|---|
| End bp | 960821 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641683727 |
|---|
| Product | chemotaxis-specific methylesterase |
|---|
| Protein accession | YP_001810638 |
|---|
| Protein GI | 172062987 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.879381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.466399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACATCG GCATCGTCAA CGACCTCCCG CTTGCCGTCG AGGCGATGCG CCGTGCGATC
GCGCGCCGGC CCGAGCATCG CGTGCTGTGG GTCGCGACCG ACGGCGCGCA GGCCGTCGAC
CTGTGCGCCG CGCAACCGCC CGACGTCGTG CTGATGGACC TGATCATGCC GAAGTGCGAC
GGGATCGAGG CGACGCGGCG GATCATGCGC TCCGGCCGCC CGTGCGCGAT CCTGATCGTG
ACGAGCTGCA TCGGCGCGAA CGCCTGGCGC GTGTTCGAAG CGATGGGCGC CGGCGCGCTC
GACGCGGTCG ACACGCCCCG CCTCGGCGAA GGCGCGGCCG GCGACACCGC CCGGCTCCTG
CTCGCGAAAA TCGACCAGAT CGGCCGGCTG CTCGACGCGC CCGGTGGCGT CCGCACGGCC
GGCACGACCA CGCGCGCGAG CGGCGGCCCG CTGATCGCGA TCGGCGCGTC CGCCGGCGGC
CCCGGCGCGC TCGCGTCGAT CCTCGGCAGC CTGCCGGCCA ACTTCAACGC GCCGATCGTG
ATCGTTCAGC ACGTGGATCG CGCGTTTGCC GAAGGGATGG CGCAATGGCT CGACGGCCAG
ACGCCGCTGA CCGTGCGCGT CGCGCGCGAA GGCGACCGCC CGCAGCCGGG CGTCGCACTG
CTCGCGGCGA CCGACGATCA CCTGCGCATC ACGCGCGCCG GCACGCTGGA ATACACGCGC
GAACCGGCCG CCACGCCGTA CCGGCCGTCG GTCGACGTGT TCTTCAACAG CCTGACCGAG
CACTGGCCGG GCCGCGTGAT CGGCGTGCTG CTGACCGGCA TGGGACGCGA CGGCGCGATC
GGCCTGAAGG CACTGCGCAT GAAGGGCTAC CACACGATCG CGCAGGACGA GGCGACGAGC
GCCGTATACG GGATGCCGAA AGCGGCCGCG ACGCTCGGCG CGGCACGCGC GATCCTGCCG
CTCGAGCGCA TCGCGGGCGA GCTGGCGGCA CTCGCGCGGA TCTGA
|
|---|
| Protein sequence | MNIGIVNDLP LAVEAMRRAI ARRPEHRVLW VATDGAQAVD LCAAQPPDVV LMDLIMPKCD
GIEATRRIMR SGRPCAILIV TSCIGANAWR VFEAMGAGAL DAVDTPRLGE GAAGDTARLL
LAKIDQIGRL LDAPGGVRTA GTTTRASGGP LIAIGASAGG PGALASILGS LPANFNAPIV
IVQHVDRAFA EGMAQWLDGQ TPLTVRVARE GDRPQPGVAL LAATDDHLRI TRAGTLEYTR
EPAATPYRPS VDVFFNSLTE HWPGRVIGVL LTGMGRDGAI GLKALRMKGY HTIAQDEATS
AVYGMPKAAA TLGAARAILP LERIAGELAA LARI
|
|---|
| |