Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3950 |
Symbol | |
ID | 6180622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 951644 |
End bp | 952963 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641683721 |
Product | major facilitator transporter |
Protein accession | YP_001810632 |
Protein GI | 172062981 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.728189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCC GATCCACCCT CGATGAGCAT GCAAGCGTCG CGACGCCGGC GCCCGAGCGC ACCGCGCGGC ATTACCTGCT GGCCGGCTGG GCCAGCATGG CCGGCACGAC GATCGAGTGG TACGACTTCT TCCTCTACGG CACCGCCGCC GCGCTGGTAT TCAACCGCAT CTTCTTTCCG TCGCTGGACC CCGTCGTCGG CACGCTCGCC GCGTTCGGCA CGTTCGCGGT CGGCTTCATC GGCCGACCGA TGGGCGGCAT CGTGTTCGGT CACTTCGGCG ACCGCATCGG GCGCAAGTCG ATGCTGATGA TCACGCTGCT GCTGATGGGC GTGCCGAGCA TGATCATCGG GCTGATCCCG TCGTACGACA GCATCGGCTA CTGGGCCGCC GCCCTGCTGA TCGCGATGCG CTTCCTGCAG GGGATGGCGG TCGGCGGCGA ATGGGGCGGC GCGGTGCTGA TGGCCGTCGA GCATGCGCCG AAGGGCCGCA AGGGGCTGTT CGGCAGCCTG CCGCAGACGG GCGTCGGGCT CGGGCTGATC CTGTCGTCGG TCGCGATGGC CGCGGTGGCC GCGCTCCCGG ACGCCGACAT GCTGTCGTGG GGCTGGCGCG TGCCGTTCCT CGCGAGCATC GCGCTGGTCG GCCTCGGCTG GTTCATCCGC GCGAAGGTGC CGGAGTCGCC GGATTTCGAG AAGATCCAGC GCCAGGGCAA GGCCGAGAAG TCGCCGGTGA CGGCCGCGCT GCGCCGCCAT CCGCGCGAAG TGCTGACGAT CGTCGGCGCG CGCGCCGCCG AGAACACCTG GTTCTACATG GTCGTCACGT TCGCCCTCGC GTATGCGACG CAGCAGCTGC ATCTGCCGAA GGCCGAGATG CTGCATGCGA TCACGGCCGG CGCGGCGCTG TCGCTCGTCA CGATGCCGCT GTGCGGGCAT CTCAGCGACC GCATCGGCCA GCGCAGGATG TTCGCGATCG GCCTCGTGCT GATGTGCGCG TTCGCCGCGC CGTTCTTCAT GATGCTCGGC ACACAGCAGA CGTCGACCGC ATGGTGGGCG ATCGTGCTCG GCCTCGGCGT CGTGTTCCCG ATTCTTTATG CGCCGGAGGC ACTGCTGTTC GCGCAGCAGT TCCCGGCGGA AATCCGCTAC AGCGGCATCT CGCTGTCGGT GCAGCTCGCC GGCGTGATCG GCGGCGGCTT CGCGCCGATG ATCGCGACGT CGCTGCTCAA GGCCGGCGGC GGCCAGCCGC ACTACGTGAT CGCCTACCTC ATGGGCTTCG GCGTGTTCGC GCTCGCCTGT ACCGCGCTGA TGCGCCCGGC GCGCGCATGA
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Protein sequence | MQTRSTLDEH ASVATPAPER TARHYLLAGW ASMAGTTIEW YDFFLYGTAA ALVFNRIFFP SLDPVVGTLA AFGTFAVGFI GRPMGGIVFG HFGDRIGRKS MLMITLLLMG VPSMIIGLIP SYDSIGYWAA ALLIAMRFLQ GMAVGGEWGG AVLMAVEHAP KGRKGLFGSL PQTGVGLGLI LSSVAMAAVA ALPDADMLSW GWRVPFLASI ALVGLGWFIR AKVPESPDFE KIQRQGKAEK SPVTAALRRH PREVLTIVGA RAAENTWFYM VVTFALAYAT QQLHLPKAEM LHAITAGAAL SLVTMPLCGH LSDRIGQRRM FAIGLVLMCA FAAPFFMMLG TQQTSTAWWA IVLGLGVVFP ILYAPEALLF AQQFPAEIRY SGISLSVQLA GVIGGGFAPM IATSLLKAGG GQPHYVIAYL MGFGVFALAC TALMRPARA
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