| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3942 |
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| Symbol | |
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| ID | 6180311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 943065 |
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| End bp | 944624 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641683713 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001810624 |
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| Protein GI | 172062973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.52476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGC CTTCTCCCGC CTCGCGCGCC GCCGCGCCCG CGAACCCGCG CCTGCCGGCC
GCCGCGACGC TCGCGGTCGC ATCGGCGACG TGCTCGCTGA TCGTGCTCGA CACGAACGTC
GTCGCGGTGT CGCTGCCGAG CATCGCGCGC GGCTTCCACG CGAGCTTCGC CGACATCGAA
TGGGTTGTGA GCGCCTACAT GACAGCGTTC GCCGCGTGCC TGCTGCCGGC CGGCGGGCTC
GCGGACCGCT TCGGGCGCAA GCGCATGCTC GGCGCGGGGC TCGCGCTCTT TTCGCTCGCG
TCGCTCGGTT GCGGACTCGC GCCGTCGGCC GGCTGGCTGA TCGCCGCGCG CGCGGCGAAG
GGCGGCGGGG CCGCGCTGCT GCTGACGGCC GCGCTCGCGG TGATCGCGAA CCGCTTTCCG
GACGGGCGCG AACGGGCCCG CGCGTGGGCG ATCTGGGGAA TGTGCATGGG GATCGCGACG
GCCGTCGCGC CGCTCGTCGG CGGCGCGATC ACGCAGTGGA TCGGCTGGCG CTGGGTGTTC
CTGCTGAACC TGCCGGTGTG TGCGCTGCTC GCGGCCGGTG CGCGCGTCGC GATCGACGAG
TCGCGCGATC CGCACGCGAA ACGGGTGGAC GCCGCCGGCA GCCTGCTGTT CGGCGCGGCG
CTCGCGTGCG CGATCGCGGC GCTGATCGGT GCGCCGTCAC ACGGCTGGCT GTCGGGCGCG
ACGCTCGGCC GGTTCGCGCT CGCCGCCGCG CTGCTGGCCG CGTTCGTCGG CGCGGAGCGC
TGGCAGGCGC GGCCGATGAT CGATCTCGCG CTGTTCCGCC AGCCGCGCTT CGTCGGCGCC
GTGCTCGCGA TGTTCGGCTA TGCGGCGTGC GCGCAGGTGA TGATGACGTT TCTGCCGCTG
TACCTGCAGA ACGCGTTCGG GATGTCGGCG ATCGACGCGG GGCTCGGGAT GCTGCCGTTC
GCGGTCGCGA TGATCGGCGG CCCGTCGCTC GGCGGCATGC TTGCCGCGCG CGTGTCGCCC
GGCGGCGTGC TGGCGGGCGG GCTCGCACTG ATCGGCGCGG GCAATCTCGC GACCGCGGCG
CTGACGGCCG GCGGCGACTA CCGGCTCGTT GCGCTCGGCA TGTTCGTGAC GGGCTGCGGC
GCCGGCATCA TGAACGGCGA CACGCAGAAG GCGATCATGG CGTGCGTGCC GCCGAACCGC
ACCGGGATGG CGTCGGGCAT CAGCACGACC ACCCGCTTCT CGGCGATCGT GACGGCCGTC
GGCGTGCTCG GCGCCGTGCT GGCCGCCAGT ACGCACGAGC AACTCGACCG GCTGCTGTCC
GCCGCACCGG GCGTGCGGGC ATTCGTCGAT GCGCCGTTCA TGTCGAGCCT GCTGGCCGGC
GATCTCGCAC AGGCGCTCGC GCACGTGCCG GCGTCGGCCG CGCGCACGCT CGCGGAAGCG
GCGCCCGCGG CGTTCGCGAG TGGGTTCGCC GATGCGTTGA CAGTGAGCGG TGTGCTCGCG
CTCATCGTTG CCATCGTTGC ATACAAGTTG CTTGCGCAAC CGATGCCGGC CGACTTCTAA
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| Protein sequence | MSQPSPASRA AAPANPRLPA AATLAVASAT CSLIVLDTNV VAVSLPSIAR GFHASFADIE
WVVSAYMTAF AACLLPAGGL ADRFGRKRML GAGLALFSLA SLGCGLAPSA GWLIAARAAK
GGGAALLLTA ALAVIANRFP DGRERARAWA IWGMCMGIAT AVAPLVGGAI TQWIGWRWVF
LLNLPVCALL AAGARVAIDE SRDPHAKRVD AAGSLLFGAA LACAIAALIG APSHGWLSGA
TLGRFALAAA LLAAFVGAER WQARPMIDLA LFRQPRFVGA VLAMFGYAAC AQVMMTFLPL
YLQNAFGMSA IDAGLGMLPF AVAMIGGPSL GGMLAARVSP GGVLAGGLAL IGAGNLATAA
LTAGGDYRLV ALGMFVTGCG AGIMNGDTQK AIMACVPPNR TGMASGISTT TRFSAIVTAV
GVLGAVLAAS THEQLDRLLS AAPGVRAFVD APFMSSLLAG DLAQALAHVP ASAARTLAEA
APAAFASGFA DALTVSGVLA LIVAIVAYKL LAQPMPADF
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