| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3940 |
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| Symbol | |
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| ID | 6180637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 940958 |
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| End bp | 941947 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641683711 |
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| Product | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001810622 |
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| Protein GI | 172062971 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.473561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGC CCCCCACCCC TGCGCGCCGC CGCGCGTTGC TGCGTGTGGC CGCCCTGGCC
GCCGCACCGC TTGCGGGCGC CGCCGCATTG CCCGCCCGCG CGGCGGCCCC CGACCTGTCG
AACGTCACGC TGGTGCTCGG CGATCAGGCC GGCGGCCTGC GCGCGCTGGC CGAGGCCGCG
CGCGTGCTCG ACGGCGTGCC GTACCGGTTT CGCTGGGCGA ATTTCCAGGG CGCCGCGCCG
CTGTTCGAAG CGCAGCGCGC GGGCGCGATC GATCTCGCGC CCGCCGGCGA CCTGCCCGTG
CTGACGGCCG CGCTCGGCGA TCCGGCGCTG CGGATCGTCG CGACGCGCGT GGGCTCGCCC
ACGTCGCTCG GCATCGTCGT GCAGCCCGAT TCGCCGGTGC GCAAGGTCGC CGACCTGAAG
GGGCGCACCG TCGTCGTGTC GTCGGCGCGC GGCAGCATCT CGCAATACCA GCTGTACGGC
GCGCTGCGCG AACACGGCCT CGCACCGGGC GACGTCGACG TGCGCTTCGT GCTGCCGGTC
GACGCGTTCG CCGCGTTCGA GGCGAAGCAG ATCGGCATCT GGGCGACCTT CGATCCTTAC
TACGGCAACG TGGTGCGGCG CGGCGCGCGC ATCGTGCGCG ACGGCAGCGG GATCAATTCG
GGGCTCGCGT TCCTCACGTC GCCGGTCGAC ACGCTCGACG ATCGATCGAA GCGCGCGGCG
CTGTCGGACG TGCTCGCGCG TCTCACCCGC GCCGGCCAGT GGGCGCTCGC GCATCCGGCC
GACTACGCGA CCGTCTACGC ATCGCTCACG CGCCTGCCGC GCGATGCGGC CGCCGATATC
GCCCGCCGGG CGGCGCTCGC GCAGCGCGGC GTCACCGCCG CGGACATCGA CGTGCTGCAA
CGCGTCGCCG ATCGCGCGGC CGCGGACGCG ATCCTGCCGA AGCGCGTCGA CGTCGCGTCG
ATCGCGGTAC GCAACCTGTC GGCCGCGTAA
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| Protein sequence | MTSPPTPARR RALLRVAALA AAPLAGAAAL PARAAAPDLS NVTLVLGDQA GGLRALAEAA
RVLDGVPYRF RWANFQGAAP LFEAQRAGAI DLAPAGDLPV LTAALGDPAL RIVATRVGSP
TSLGIVVQPD SPVRKVADLK GRTVVVSSAR GSISQYQLYG ALREHGLAPG DVDVRFVLPV
DAFAAFEAKQ IGIWATFDPY YGNVVRRGAR IVRDGSGINS GLAFLTSPVD TLDDRSKRAA
LSDVLARLTR AGQWALAHPA DYATVYASLT RLPRDAAADI ARRAALAQRG VTAADIDVLQ
RVADRAAADA ILPKRVDVAS IAVRNLSAA
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